RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 CARD10Q9BWT7 1032 aa21.78■■□□□ 1.08
POLR2E-201ENST00000215587 NWD2Q9ULI1 1742 aa21.77■■□□□ 1.08
POLR2E-201ENST00000215587 RIPK4P57078 832 aa21.77■■□□□ 1.08
POLR2E-201ENST00000215587 CCDC27Q2M243 656 aa21.77■■□□□ 1.08
POLR2E-201ENST00000215587 GAS2L2Q8NHY3 880 aa21.77■■□□□ 1.08
POLR2E-201ENST00000215587 SLIT2O94813 1529 aa21.76■■□□□ 1.07
POLR2E-201ENST00000215587 TATP17735 454 aaPredicted RBP21.76■■□□□ 1.07
POLR2E-201ENST00000215587 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
POLR2E-201ENST00000215587 PLEKHG2Q9H7P9 1386 aa21.75■■□□□ 1.07
POLR2E-201ENST00000215587 ATRNO75882 1429 aa21.75■■□□□ 1.07
POLR2E-201ENST00000215587 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
POLR2E-201ENST00000215587 FNBP4Q8N3X1 1017 aaPredicted RBP21.75■■□□□ 1.07
POLR2E-201ENST00000215587 NRAPQ86VF7 1730 aa21.75■■□□□ 1.07
POLR2E-201ENST00000215587 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
POLR2E-201ENST00000215587 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
POLR2E-201ENST00000215587 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
POLR2E-201ENST00000215587 MTHFSDQ2M296 383 aaKnown RBP21.73■■□□□ 1.07
POLR2E-201ENST00000215587 WWC1Q8IX03 1113 aa21.73■■□□□ 1.07
POLR2E-201ENST00000215587 MEGF6O75095 1541 aa21.71■■□□□ 1.07
POLR2E-201ENST00000215587 GOLGA2Q08379 1002 aa21.71■■□□□ 1.07
POLR2E-201ENST00000215587 UNC5CLQ8IV45 518 aa21.7■■□□□ 1.06
POLR2E-201ENST00000215587 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
POLR2E-201ENST00000215587 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
POLR2E-201ENST00000215587 PARP4Q9UKK3 1724 aaKnown RBP21.69■■□□□ 1.06
POLR2E-201ENST00000215587 IL2RBP14784 551 aa21.69■■□□□ 1.06
POLR2E-201ENST00000215587 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
POLR2E-201ENST00000215587 ZNF530Q6P9A1 599 aaPredicted RBP21.69■■□□□ 1.06
POLR2E-201ENST00000215587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.69■■□□□ 1.06
POLR2E-201ENST00000215587 USP35Q9P2H5 1018 aa21.69■■□□□ 1.06
POLR2E-201ENST00000215587 SPG7Q9UQ90 795 aa21.69■■□□□ 1.06
POLR2E-201ENST00000215587 MAP3K5Q99683 1374 aa21.69■■□□□ 1.06
POLR2E-201ENST00000215587 OVOS2A0A0G2JMS6 1433 aa21.69■■□□□ 1.06
POLR2E-201ENST00000215587 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
POLR2E-201ENST00000215587 CCDC9Q9Y3X0 531 aaKnown RBP21.68■■□□□ 1.06
POLR2E-201ENST00000215587 LRP5O75197 1615 aa21.68■■□□□ 1.06
POLR2E-201ENST00000215587 C1orf141Q5JVX7 400 aa21.67■■□□□ 1.06
POLR2E-201ENST00000215587 BCL9LQ86UU0 1499 aa21.66■■□□□ 1.06
POLR2E-201ENST00000215587 SPATA31A1Q5TZJ5 1347 aa21.66■■□□□ 1.06
POLR2E-201ENST00000215587 GNAT3A8MTJ3 354 aa21.66■■□□□ 1.06
POLR2E-201ENST00000215587 HTATSF1O43719 755 aaKnown RBP21.66■■□□□ 1.06
POLR2E-201ENST00000215587 THRAP3Q9Y2W1 955 aaKnown RBP21.66■■□□□ 1.06
POLR2E-201ENST00000215587 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.66■■□□□ 1.06
POLR2E-201ENST00000215587 DLG5Q8TDM6 1919 aa21.65■■□□□ 1.06
POLR2E-201ENST00000215587 IL16Q14005 1332 aa21.65■■□□□ 1.06
POLR2E-201ENST00000215587 SPATA31A5Q5VU36 1347 aa21.65■■□□□ 1.06
POLR2E-201ENST00000215587 SPATA31A7Q8IWB4 1347 aa21.65■■□□□ 1.06
POLR2E-201ENST00000215587 E9PSI1 815 aa21.65■■□□□ 1.06
POLR2E-201ENST00000215587 VPS72Q15906 364 aa21.65■■□□□ 1.06
POLR2E-201ENST00000215587 PKD1L3Q7Z443 1732 aa21.64■■□□□ 1.06
POLR2E-201ENST00000215587 AKAP4Q5JQC9 854 aa21.64■■□□□ 1.05
POLR2E-201ENST00000215587 CDCA7LQ96GN5 454 aa21.63■■□□□ 1.05
POLR2E-201ENST00000215587 CDCA7Q9BWT1 371 aaPredicted RBP21.63■■□□□ 1.05
POLR2E-201ENST00000215587 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
POLR2E-201ENST00000215587 SLFN5Q08AF3 891 aa21.62■■□□□ 1.05
POLR2E-201ENST00000215587 ZCRB1Q8TBF4 217 aaKnown RBP21.62■■□□□ 1.05
POLR2E-201ENST00000215587 MYH16Q9H6N6 1097 aa21.62■■□□□ 1.05
POLR2E-201ENST00000215587 PCDH11XQ9BZA7 1347 aa21.61■■□□□ 1.05
POLR2E-201ENST00000215587 PCDH11YQ9BZA8 1340 aa21.61■■□□□ 1.05
POLR2E-201ENST00000215587 MCM10Q7L590 875 aa21.61■■□□□ 1.05
POLR2E-201ENST00000215587 THUMPD2Q9BTF0 503 aaKnown RBP21.61■■□□□ 1.05
POLR2E-201ENST00000215587 DCTN1Q14203 1278 aa21.6■■□□□ 1.05
POLR2E-201ENST00000215587 IFNL2Q8IZJ0 200 aa21.6■■□□□ 1.05
POLR2E-201ENST00000215587 GJD4Q96KN9 370 aaPredicted RBP21.6■■□□□ 1.05
POLR2E-201ENST00000215587 WNK3Q9BYP7 1800 aa21.59■■□□□ 1.05
POLR2E-201ENST00000215587 BARGINQ6ZT62 677 aa21.59■■□□□ 1.05
POLR2E-201ENST00000215587 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.05
POLR2E-201ENST00000215587 PHKG2P15735 406 aa21.58■■□□□ 1.05
POLR2E-201ENST00000215587 GNAI1P63096 354 aa21.58■■□□□ 1.05
POLR2E-201ENST00000215587 SPINK5Q9NQ38 1064 aaPredicted RBP21.58■■□□□ 1.05
POLR2E-201ENST00000215587 IFT57Q9NWB7 429 aa21.58■■□□□ 1.05
POLR2E-201ENST00000215587 DUSP27Q5VZP5 1158 aa21.57■■□□□ 1.04
POLR2E-201ENST00000215587 LAS1LQ9Y4W2 734 aaKnown RBP21.57■■□□□ 1.04
POLR2E-201ENST00000215587 LRRC37A3O60309 1634 aa21.57■■□□□ 1.04
POLR2E-201ENST00000215587 CYP27B1O15528 508 aa21.56■■□□□ 1.04
POLR2E-201ENST00000215587 TRMT2AQ8IZ69 625 aaKnown RBP21.56■■□□□ 1.04
POLR2E-201ENST00000215587 TNS2Q63HR2 1409 aa21.55■■□□□ 1.04
POLR2E-201ENST00000215587 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
POLR2E-201ENST00000215587 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
POLR2E-201ENST00000215587 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
POLR2E-201ENST00000215587 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
POLR2E-201ENST00000215587 CEMIPQ8WUJ3 1361 aa21.55■■□□□ 1.04
POLR2E-201ENST00000215587 EXOC5O00471 708 aa21.54■■□□□ 1.04
POLR2E-201ENST00000215587 SF3B2Q13435 895 aaKnown RBP21.54■■□□□ 1.04
POLR2E-201ENST00000215587 DDX54Q8TDD1 881 aaKnown RBP21.54■■□□□ 1.04
POLR2E-201ENST00000215587 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
POLR2E-201ENST00000215587 TEFQ10587 303 aa21.53■■□□□ 1.04
POLR2E-201ENST00000215587 DCAF5Q96JK2 942 aa21.53■■□□□ 1.04
POLR2E-201ENST00000215587 FANCIQ9NVI1 1328 aa21.53■■□□□ 1.04
POLR2E-201ENST00000215587 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
POLR2E-201ENST00000215587 DDB1Q16531 1140 aa21.52■■□□□ 1.04
POLR2E-201ENST00000215587 FAM98CQ17RN3 349 aaKnown RBP21.52■■□□□ 1.04
POLR2E-201ENST00000215587 LGR6Q9HBX8 967 aa21.52■■□□□ 1.04
POLR2E-201ENST00000215587 GLI3P10071 1580 aa21.52■■□□□ 1.04
POLR2E-201ENST00000215587 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.03
POLR2E-201ENST00000215587 ADAMTS7Q9UKP4 1686 aa21.51■■□□□ 1.03
POLR2E-201ENST00000215587 TSR2Q969E8 191 aaKnown RBP21.51■■□□□ 1.03
POLR2E-201ENST00000215587 KDM6AO15550 1401 aaPredicted RBP21.51■■□□□ 1.03
POLR2E-201ENST00000215587 A0A0G2JS52 829 aa21.5■■□□□ 1.03
POLR2E-201ENST00000215587 MYT1Q01538 1121 aa21.5■■□□□ 1.03
POLR2E-201ENST00000215587 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms