RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PRDM4Q9UKN5 801 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 F6X3S4 739 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 ALDH1L2Q3SY69 923 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 ZHX1Q9UKY1 873 aaPredicted RBP7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 DLG5Q8TDM6 1919 aa7.18□□□□□ -1.26
CEACAM1-201ENST00000161559 MAP2P11137 1827 aaKnown RBP7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 GOLGA6L22H0YM25 854 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 SOX12O15370 315 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 MCM10Q7L590 875 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 CDK19Q9BWU1 502 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 NOL7Q9UMY1 257 aaKnown RBP7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 PDLIM2Q96JY6 352 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 UPF3BQ9BZI7 483 aaKnown RBP7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 ISY1Q9ULR0 285 aaKnown RBP7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 FAM135BQ49AJ0 1406 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 MSH6P52701 1360 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 ABCA9Q8IUA7 1624 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 ATP10DQ9P241 1426 aa7.17□□□□□ -1.26
CEACAM1-201ENST00000161559 IL16Q14005 1332 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 FRMPD1Q5SYB0 1578 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 PTCH1Q13635 1447 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 NEK4P51957 841 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 NFE2L2Q16236 605 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 CLEC17AQ6ZS10 378 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 ANP32BQ92688 251 aaKnown RBP7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 EXOC6BQ9Y2D4 811 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 RABEP1Q15276 862 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 NECTIN2Q92692 538 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 DCTPP1Q9H773 170 aa7.16□□□□□ -1.26
CEACAM1-201ENST00000161559 ABCC3O15438 1527 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 NEXMIFQ5QGS0 1516 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 ARHGEF40Q8TER5 1519 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 FBXO31Q5XUX0 539 aaPredicted RBP7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 CEP85Q6P2H3 762 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 G2E3Q7L622 706 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 ZKSCAN5Q9Y2L8 839 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 FCHSD2O94868 740 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 MAP4K4O95819 1239 aaPredicted RBP7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 SLC4A10Q6U841 1118 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 UNC5CLQ8IV45 518 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 TMX3Q96JJ7 454 aa7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 TTC12Q9H892 705 aaPredicted RBP7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.15□□□□□ -1.26
CEACAM1-201ENST00000161559 PTPRMP28827 1452 aa7.15□□□□□ -1.27
CEACAM1-201ENST00000161559 NSD2O96028 1365 aa7.15□□□□□ -1.27
CEACAM1-201ENST00000161559 PNPLA6Q8IY17 1366 aa7.15□□□□□ -1.27
CEACAM1-201ENST00000161559 NUTM2FA1L443 756 aa7.15□□□□□ -1.27
CEACAM1-201ENST00000161559 RGS12O14924 1447 aa7.15□□□□□ -1.27
CEACAM1-201ENST00000161559 PIK3R4Q99570 1358 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 ZNF853P0CG23 659 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 LRSAM1Q6UWE0 723 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 POGZQ7Z3K3 1410 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 YTHDC2Q9H6S0 1430 aaKnown RBP7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 IBTKQ9P2D0 1353 aaPredicted RBP7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 FOXO3O43524 673 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 ZNF500O60304 480 aaPredicted RBP7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 IGSF3O75054 1194 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 TERF2IPQ9NYB0 399 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 NEURL4Q96JN8 1562 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 IL13P35225 146 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 ZNF710Q8N1W2 664 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 ZNF428Q96B54 188 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 USP25Q9UHP3 1055 aa7.14□□□□□ -1.27
CEACAM1-201ENST00000161559 CPA1P15085 419 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 NUCB2P80303 420 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 INTS3Q68E01 1043 aaKnown RBP7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 VGFO15240 615 aaPredicted RBP7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 DDX54Q8TDD1 881 aaKnown RBP7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 RTL1A6NKG5 1358 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 RIMS2Q9UQ26 1411 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 PLCB2Q00722 1185 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 COL9A3Q14050 684 aaPredicted RBP7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 ANKRD44Q8N8A2 993 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 IFT57Q9NWB7 429 aa7.13□□□□□ -1.27
CEACAM1-201ENST00000161559 ANKRD26Q9UPS8 1709 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 AP5Z1O43299 807 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 PTMAP06454 111 aaKnown RBP7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 GNAI1P63096 354 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 RILPL2Q969X0 211 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 CFAP44Q96MT7 982 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 KIF20BQ96Q89 1820 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 PNMA6EA0A0J9YXQ4 647 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 ST18O60284 1047 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 DNTTIP2Q5QJE6 756 aaKnown RBP7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 HDGFL2Q7Z4V5 671 aaPredicted RBP7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 RNF216Q9NWF9 866 aaPredicted RBP7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 PIK3C2BO00750 1634 aa7.12□□□□□ -1.27
CEACAM1-201ENST00000161559 SLC4A2P04920 1241 aa7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 HCLS1P14317 486 aaPredicted RBP7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 BRPF1P55201 1214 aaPredicted RBP7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 CBX1P83916 185 aa7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 USP48Q86UV5 1035 aa7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 ARHGAP45Q92619 1136 aa7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 ANO2Q9NQ90 1003 aa7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 CNPY2Q9Y2B0 182 aa7.11□□□□□ -1.27
CEACAM1-201ENST00000161559 RIMS1Q86UR5 1692 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms