RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 AKAP2Q9Y2D5 859 aa27.48■■□□□ 1.99
TARBP1-201ENST00000040877 CAVIN1Q6NZI2 390 aaKnown RBP27.48■■□□□ 1.99
TARBP1-201ENST00000040877 NME9Q86XW9 330 aa27.48■■□□□ 1.99
TARBP1-201ENST00000040877 NAP1L1P55209 391 aaKnown RBP27.48■■□□□ 1.99
TARBP1-201ENST00000040877 TSPY26PQ9H489 355 aa27.48■■□□□ 1.99
TARBP1-201ENST00000040877 CCDC184Q52MB2 194 aa27.47■■□□□ 1.99
TARBP1-201ENST00000040877 PRPF40AO75400 957 aaKnown RBP27.47■■□□□ 1.99
TARBP1-201ENST00000040877 CIZ1Q9ULV3 898 aaPredicted RBP27.47■■□□□ 1.99
TARBP1-201ENST00000040877 FIBPO43427 364 aa27.47■■□□□ 1.99
TARBP1-201ENST00000040877 KRT85P78386 507 aa27.46■■□□□ 1.99
TARBP1-201ENST00000040877 CCAR1Q8IX12 1150 aaKnown RBP27.46■■□□□ 1.99
TARBP1-201ENST00000040877 TRIM5Q9C035 493 aa27.46■■□□□ 1.99
TARBP1-201ENST00000040877 ACBD3Q9H3P7 528 aa27.46■■□□□ 1.99
TARBP1-201ENST00000040877 NOS1P29475 1434 aa27.45■■□□□ 1.99
TARBP1-201ENST00000040877 THOC2Q8NI27 1593 aaKnown RBP27.45■■□□□ 1.99
TARBP1-201ENST00000040877 MCM10Q7L590 875 aa27.45■■□□□ 1.99
TARBP1-201ENST00000040877 GLRX3O76003 335 aaKnown RBP27.45■■□□□ 1.98
TARBP1-201ENST00000040877 ZNF771Q7L3S4 317 aaPredicted RBP27.45■■□□□ 1.98
TARBP1-201ENST00000040877 MAGEC2Q9UBF1 373 aaPredicted RBP27.45■■□□□ 1.98
TARBP1-201ENST00000040877 CCP110O43303 1012 aa27.44■■□□□ 1.98
TARBP1-201ENST00000040877 CDR1P51861 262 aa27.44■■□□□ 1.98
TARBP1-201ENST00000040877 NOL7Q9UMY1 257 aaKnown RBP27.44■■□□□ 1.98
TARBP1-201ENST00000040877 ODF2Q5BJF6 829 aa27.44■■□□□ 1.98
TARBP1-201ENST00000040877 FBXO31Q5XUX0 539 aaPredicted RBP27.44■■□□□ 1.98
TARBP1-201ENST00000040877 SMARCE1Q969G3 411 aa27.44■■□□□ 1.98
TARBP1-201ENST00000040877 SOGA3Q5TF21 947 aa27.44■■□□□ 1.98
TARBP1-201ENST00000040877 NKTRP30414 1462 aaKnown RBP27.44■■□□□ 1.98
TARBP1-201ENST00000040877 HSP90AB3PQ58FF7 597 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 IL1RAPL2Q9NP60 686 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 DACH1Q9UI36 760 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
TARBP1-201ENST00000040877 RARSP54136 660 aaKnown RBP27.43■■□□□ 1.98
TARBP1-201ENST00000040877 CCDC173Q0VFZ6 552 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 PDILTQ8N807 584 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 UBAC1Q9BSL1 405 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 PDRG1Q9NUG6 133 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 TDO2P48775 406 aa27.43■■□□□ 1.98
TARBP1-201ENST00000040877 LARP1BQ659C4 914 aaKnown RBP27.42■■□□□ 1.98
TARBP1-201ENST00000040877 IL27Q8NEV9 243 aa27.42■■□□□ 1.98
TARBP1-201ENST00000040877 BRPF3Q9ULD4 1205 aa27.42■■□□□ 1.98
TARBP1-201ENST00000040877 TEX35Q5T0J7 233 aa27.41■■□□□ 1.98
TARBP1-201ENST00000040877 RNF214Q8ND24 703 aa27.41■■□□□ 1.98
TARBP1-201ENST00000040877 RAI14Q9P0K7 980 aa27.41■■□□□ 1.98
TARBP1-201ENST00000040877 KRT18P05783 430 aaKnown RBP27.41■■□□□ 1.98
TARBP1-201ENST00000040877 PIP4K2BP78356 416 aa27.41■■□□□ 1.98
TARBP1-201ENST00000040877 WASF1Q92558 559 aa27.41■■□□□ 1.98
TARBP1-201ENST00000040877 LRP2BPQ9P2M1 347 aa27.41■■□□□ 1.98
TARBP1-201ENST00000040877 SSH1Q8WYL5 1049 aa27.4■■□□□ 1.98
TARBP1-201ENST00000040877 KDM4AO75164 1064 aa27.4■■□□□ 1.98
TARBP1-201ENST00000040877 CWC27Q6UX04 472 aaKnown RBP27.4■■□□□ 1.98
TARBP1-201ENST00000040877 CCDC192P0DO97 292 aa27.39■■□□□ 1.98
TARBP1-201ENST00000040877 MAP4K4O95819 1239 aaPredicted RBP27.39■■□□□ 1.98
TARBP1-201ENST00000040877 HYPKQ9NX55 129 aa27.39■■□□□ 1.98
TARBP1-201ENST00000040877 EMILIN1Q9Y6C2 1016 aa27.39■■□□□ 1.98
TARBP1-201ENST00000040877 JAKMIP1Q96N16 626 aaKnown RBP27.39■■□□□ 1.97
TARBP1-201ENST00000040877 MX1P20591 662 aa27.39■■□□□ 1.97
TARBP1-201ENST00000040877 ATP2B2Q01814 1243 aa27.39■■□□□ 1.97
TARBP1-201ENST00000040877 STIM1Q13586 685 aa27.39■■□□□ 1.97
TARBP1-201ENST00000040877 RUFY1Q96T51 708 aa27.39■■□□□ 1.97
TARBP1-201ENST00000040877 THUMPD2Q9BTF0 503 aaKnown RBP27.39■■□□□ 1.97
TARBP1-201ENST00000040877 CFAP45Q9UL16 551 aa27.39■■□□□ 1.97
TARBP1-201ENST00000040877 IMMTQ16891 758 aaKnown RBP27.38■■□□□ 1.97
TARBP1-201ENST00000040877 METTL24Q5JXM2 366 aa27.38■■□□□ 1.97
TARBP1-201ENST00000040877 DBF4Q9UBU7 674 aaPredicted RBP27.38■■□□□ 1.97
TARBP1-201ENST00000040877 GPATCH8Q9UKJ3 1502 aaKnown RBP27.38■■□□□ 1.97
TARBP1-201ENST00000040877 STK3Q13188 491 aa27.38■■□□□ 1.97
TARBP1-201ENST00000040877 KDM5BQ9UGL1 1544 aa27.38■■□□□ 1.97
TARBP1-201ENST00000040877 ANKRD36BQ8N2N9 1353 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 FOXO3O43524 673 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 PTPRCP08575 1304 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 SMC2O95347 1197 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 ME1P48163 572 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 DMRT2Q9Y5R5 561 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 ZNF287Q9HBT7 754 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 IFIT1P09914 478 aaKnown RBP27.37■■□□□ 1.97
TARBP1-201ENST00000040877 AIDAQ96BJ3 306 aa27.37■■□□□ 1.97
TARBP1-201ENST00000040877 SETQ01105 290 aaPredicted RBP27.36■■□□□ 1.97
TARBP1-201ENST00000040877 NUP133Q8WUM0 1156 aa27.36■■□□□ 1.97
TARBP1-201ENST00000040877 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
TARBP1-201ENST00000040877 EXOC6BQ9Y2D4 811 aa27.36■■□□□ 1.97
TARBP1-201ENST00000040877 AK7Q96M32 723 aa27.36■■□□□ 1.97
TARBP1-201ENST00000040877 CNKSR2Q8WXI2 1034 aa27.36■■□□□ 1.97
TARBP1-201ENST00000040877 MIS18AQ9NYP9 233 aa27.36■■□□□ 1.97
TARBP1-201ENST00000040877 RDXP35241 583 aaKnown RBP27.36■■□□□ 1.97
TARBP1-201ENST00000040877 PTCD1O75127 700 aaKnown RBP27.35■■□□□ 1.97
TARBP1-201ENST00000040877 DNAAF4Q8WXU2 420 aa27.35■■□□□ 1.97
TARBP1-201ENST00000040877 IDH1O75874 414 aaKnown RBP27.35■■□□□ 1.97
TARBP1-201ENST00000040877 U3KPZ7 1027 aaPredicted RBP27.35■■□□□ 1.97
TARBP1-201ENST00000040877 FMNL2Q96PY5 1086 aa27.34■■□□□ 1.97
TARBP1-201ENST00000040877 WWC2Q6AWC2 1192 aa27.34■■□□□ 1.97
TARBP1-201ENST00000040877 TEX13AQ9BXU3 409 aaPredicted RBP27.34■■□□□ 1.97
TARBP1-201ENST00000040877 TNRQ92752 1358 aa27.34■■□□□ 1.97
TARBP1-201ENST00000040877 PLCH2O75038 1416 aa27.34■■□□□ 1.97
TARBP1-201ENST00000040877 CEBPZQ03701 1054 aaKnown RBP27.34■■□□□ 1.97
TARBP1-201ENST00000040877 TNMDQ9H2S6 317 aa27.34■■□□□ 1.97
TARBP1-201ENST00000040877 RBM5P52756 815 aaKnown RBP eCLIP27.33■■□□□ 1.97
TARBP1-201ENST00000040877 ZPR1O75312 459 aa27.33■■□□□ 1.97
TARBP1-201ENST00000040877 DCTN1Q14203 1278 aa27.33■■□□□ 1.97
TARBP1-201ENST00000040877 C11orf95C9JLR9 678 aaPredicted RBP27.33■■□□□ 1.96
TARBP1-201ENST00000040877 CAVIN4Q5BKX8 364 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms