RNA–Protein interactions for RNA: ENST00000008440.9

SPRTN-201, Transcript of SprT-like N-terminal domain, humanhuman

TSL 2 BASIC

Gene SPRTN, Length 1,667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-201ENST00000008440 DLG5Q8TDM6 1919 aa28.37■■■□□ 2.13
SPRTN-201ENST00000008440 PKD1L3Q7Z443 1732 aa28.37■■■□□ 2.13
SPRTN-201ENST00000008440 SHANK3Q9BYB0 1731 aa28.37■■■□□ 2.13
SPRTN-201ENST00000008440 A0A0G2JS52 829 aa28.37■■■□□ 2.13
SPRTN-201ENST00000008440 RBM6P78332 1123 aaKnown RBP28.37■■■□□ 2.13
SPRTN-201ENST00000008440 MYT1Q01538 1121 aa28.37■■■□□ 2.13
SPRTN-201ENST00000008440 THSD7AQ9UPZ6 1657 aa28.37■■■□□ 2.13
SPRTN-201ENST00000008440 OVOS2A0A0G2JMS6 1433 aa28.36■■■□□ 2.13
SPRTN-201ENST00000008440 LRRC37A3O60309 1634 aa28.36■■■□□ 2.13
SPRTN-201ENST00000008440 BRWD3Q6RI45 1802 aa28.35■■■□□ 2.13
SPRTN-201ENST00000008440 SENP3-EIF4A1A0A087X0R7 540 aa28.35■■■□□ 2.13
SPRTN-201ENST00000008440 RXRBP28702 533 aa28.35■■■□□ 2.13
SPRTN-201ENST00000008440 PNNQ9H307 717 aaKnown RBP28.35■■■□□ 2.13
SPRTN-201ENST00000008440 MAPK8IP3Q9UPT6 1336 aa28.33■■■□□ 2.13
SPRTN-201ENST00000008440 RUNDC1Q96C34 613 aa28.33■■■□□ 2.13
SPRTN-201ENST00000008440 CDCA7Q9BWT1 371 aaPredicted RBP28.33■■■□□ 2.13
SPRTN-201ENST00000008440 KAT6BQ8WYB5 2073 aa28.33■■■□□ 2.13
SPRTN-201ENST00000008440 VIRMAQ69YN4 1812 aaKnown RBP28.33■■■□□ 2.13
SPRTN-201ENST00000008440 NEFMP07197 916 aa28.32■■■□□ 2.12
SPRTN-201ENST00000008440 ONECUT3O60422 494 aaPredicted RBP28.31■■■□□ 2.12
SPRTN-201ENST00000008440 DDB1Q16531 1140 aa28.3■■■□□ 2.12
SPRTN-201ENST00000008440 MTHFSDQ2M296 383 aaKnown RBP28.3■■■□□ 2.12
SPRTN-201ENST00000008440 PLEKHO1Q53GL0 409 aaPredicted RBP28.3■■■□□ 2.12
SPRTN-201ENST00000008440 ZCRB1Q8TBF4 217 aaKnown RBP28.3■■■□□ 2.12
SPRTN-201ENST00000008440 EXOC5O00471 708 aa28.29■■■□□ 2.12
SPRTN-201ENST00000008440 SEPT12Q8IYM1 358 aa28.29■■■□□ 2.12
SPRTN-201ENST00000008440 SPG7Q9UQ90 795 aa28.29■■■□□ 2.12
SPRTN-201ENST00000008440 AMOTQ4VCS5 1084 aa28.28■■■□□ 2.12
SPRTN-201ENST00000008440 TNS2Q63HR2 1409 aa28.27■■■□□ 2.12
SPRTN-201ENST00000008440 APAF1O14727 1248 aa28.27■■■□□ 2.12
SPRTN-201ENST00000008440 ZNF530Q6P9A1 599 aaPredicted RBP28.26■■■□□ 2.12
SPRTN-201ENST00000008440 DDX54Q8TDD1 881 aaKnown RBP28.26■■■□□ 2.12
SPRTN-201ENST00000008440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.26■■■□□ 2.12
SPRTN-201ENST00000008440 RRP7AQ9Y3A4 280 aaKnown RBP28.26■■■□□ 2.12
SPRTN-201ENST00000008440 NEUROD2Q15784 382 aa28.25■■■□□ 2.11
SPRTN-201ENST00000008440 PLEKHG2Q9H7P9 1386 aa28.24■■■□□ 2.11
SPRTN-201ENST00000008440 RGS12O14924 1447 aa28.24■■■□□ 2.11
SPRTN-201ENST00000008440 CYP27B1O15528 508 aa28.23■■■□□ 2.11
SPRTN-201ENST00000008440 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
SPRTN-201ENST00000008440 PCDH11XQ9BZA7 1347 aa28.23■■■□□ 2.11
SPRTN-201ENST00000008440 PCDH11YQ9BZA8 1340 aa28.23■■■□□ 2.11
SPRTN-201ENST00000008440 NFE2L2Q16236 605 aa28.23■■■□□ 2.11
SPRTN-201ENST00000008440 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
SPRTN-201ENST00000008440 PDE3BQ13370 1112 aa28.21■■■□□ 2.11
SPRTN-201ENST00000008440 EP400Q96L91 3159 aa28.2■■■□□ 2.11
SPRTN-201ENST00000008440 PHKG2P15735 406 aa28.2■■■□□ 2.11
SPRTN-201ENST00000008440 C1orf141Q5JVX7 400 aa28.2■■■□□ 2.11
SPRTN-201ENST00000008440 SALL2Q9Y467 1007 aaPredicted RBP28.2■■■□□ 2.11
SPRTN-201ENST00000008440 RIPK4P57078 832 aa28.19■■■□□ 2.1
SPRTN-201ENST00000008440 IFNL2Q8IZJ0 200 aa28.19■■■□□ 2.1
SPRTN-201ENST00000008440 MARCH10Q8NA82 808 aaPredicted RBP28.19■■■□□ 2.1
SPRTN-201ENST00000008440 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
SPRTN-201ENST00000008440 AKAP4Q5JQC9 854 aa28.18■■■□□ 2.1
SPRTN-201ENST00000008440 FAM182BQ5T319 152 aa28.18■■■□□ 2.1
SPRTN-201ENST00000008440 MAP3K5Q99683 1374 aa28.16■■■□□ 2.1
SPRTN-201ENST00000008440 GNAT3A8MTJ3 354 aa28.16■■■□□ 2.1
SPRTN-201ENST00000008440 MPRIPQ6WCQ1 1025 aa28.16■■■□□ 2.1
SPRTN-201ENST00000008440 TOGARAM1Q9Y4F4 1720 aa28.14■■■□□ 2.1
SPRTN-201ENST00000008440 KRT27Q7Z3Y8 459 aa28.14■■■□□ 2.1
SPRTN-201ENST00000008440 DOT1LQ8TEK3 1739 aa28.14■■■□□ 2.09
SPRTN-201ENST00000008440 DCTN1Q14203 1278 aa28.13■■■□□ 2.09
SPRTN-201ENST00000008440 ITGB4P16144 1822 aa28.13■■■□□ 2.09
SPRTN-201ENST00000008440 SBF2Q86WG5 1849 aa28.13■■■□□ 2.09
SPRTN-201ENST00000008440 HNRNPUQ00839 825 aaKnown RBP eCLIP28.13■■■□□ 2.09
SPRTN-201ENST00000008440 MCM10Q7L590 875 aa28.12■■■□□ 2.09
SPRTN-201ENST00000008440 LGR6Q9HBX8 967 aa28.12■■■□□ 2.09
SPRTN-201ENST00000008440 TRIM35Q9UPQ4 493 aa28.12■■■□□ 2.09
SPRTN-201ENST00000008440 KDM6AO15550 1401 aaPredicted RBP28.11■■■□□ 2.09
SPRTN-201ENST00000008440 RTF1Q92541 710 aaKnown RBP28.11■■■□□ 2.09
SPRTN-201ENST00000008440 ADAMTS7Q9UKP4 1686 aa28.1■■■□□ 2.09
SPRTN-201ENST00000008440 NKX1-1Q15270 411 aaPredicted RBP28.1■■■□□ 2.09
SPRTN-201ENST00000008440 IL17REQ8NFR9 667 aa28.1■■■□□ 2.09
SPRTN-201ENST00000008440 YTHDC1Q96MU7 727 aaKnown RBP28.1■■■□□ 2.09
SPRTN-201ENST00000008440 THUMPD2Q9BTF0 503 aaKnown RBP28.1■■■□□ 2.09
SPRTN-201ENST00000008440 HSP90AB1P08238 724 aaKnown RBP28.09■■■□□ 2.09
SPRTN-201ENST00000008440 DCAF5Q96JK2 942 aa28.09■■■□□ 2.09
SPRTN-201ENST00000008440 RNMTO43148 476 aaKnown RBP28.07■■■□□ 2.08
SPRTN-201ENST00000008440 LMOD3Q0VAK6 560 aa28.07■■■□□ 2.08
SPRTN-201ENST00000008440 HTATSF1O43719 755 aaKnown RBP28.06■■■□□ 2.08
SPRTN-201ENST00000008440 ACSBG1Q96GR2 724 aa28.06■■■□□ 2.08
SPRTN-201ENST00000008440 SIPA1L3O60292 1781 aaPredicted RBP28.05■■■□□ 2.08
SPRTN-201ENST00000008440 WWC1Q8IX03 1113 aa28.04■■■□□ 2.08
SPRTN-201ENST00000008440 CEMIPQ8WUJ3 1361 aa28.03■■■□□ 2.08
SPRTN-201ENST00000008440 CCDC27Q2M243 656 aa28.03■■■□□ 2.08
SPRTN-201ENST00000008440 SYTL4Q96C24 671 aaPredicted RBP28.02■■■□□ 2.08
SPRTN-201ENST00000008440 PRIM1P49642 420 aaKnown RBP28■■■□□ 2.07
SPRTN-201ENST00000008440 NHSQ6T4R5 1651 aa28■■■□□ 2.07
SPRTN-201ENST00000008440 NCBP3Q53F19 620 aaKnown RBP28■■■□□ 2.07
SPRTN-201ENST00000008440 FAM196AQ6ZSG2 479 aa28■■■□□ 2.07
SPRTN-201ENST00000008440 NGEFQ8N5V2 710 aa28■■■□□ 2.07
SPRTN-201ENST00000008440 NFATC2IPQ8NCF5 419 aa28■■■□□ 2.07
SPRTN-201ENST00000008440 ERVV-2B6SEH9 535 aa27.99■■■□□ 2.07
SPRTN-201ENST00000008440 KCNQ2O43526 872 aa27.99■■■□□ 2.07
SPRTN-201ENST00000008440 CABP4P57796 275 aa27.99■■■□□ 2.07
SPRTN-201ENST00000008440 TEFQ10587 303 aa27.99■■■□□ 2.07
SPRTN-201ENST00000008440 SLC52A2Q9HAB3 445 aa27.98■■■□□ 2.07
SPRTN-201ENST00000008440 BCL9O00512 1426 aa27.98■■■□□ 2.07
SPRTN-201ENST00000008440 MRC1P22897 1456 aa27.98■■■□□ 2.07
SPRTN-201ENST00000008440 BTAF1O14981 1849 aa27.97■■■□□ 2.07
SPRTN-201ENST00000008440 PTF1AQ7RTS3 328 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms