RNA–Protein interactions for RNA: ENSMUST00000218686.1

Trappc6b-207, Transcript of Trafficking protein particle complex subunit 6B, mousemouse

TSL 3 BASIC

Gene Trappc6b, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6b-207ENSMUST00000218686 Hmgb2P30681 210 aaKnown RBP29.91■■■□□ 2.38
Trappc6b-207ENSMUST00000218686 Col23a1Q8K4G2 532 aa29.9■■■□□ 2.38
Trappc6b-207ENSMUST00000218686 Prom2Q3UUY6 835 aa29.89■■■□□ 2.38
Trappc6b-207ENSMUST00000218686 Adgre1Q61549 931 aa29.89■■■□□ 2.38
Trappc6b-207ENSMUST00000218686 Znrd1-asQ8R0E5 213 aa29.89■■■□□ 2.38
Trappc6b-207ENSMUST00000218686 Klc3Q91W40 508 aa29.86■■■□□ 2.37
Trappc6b-207ENSMUST00000218686 Rnaseh2aQ9CWY8 301 aa29.84■■■□□ 2.37
Trappc6b-207ENSMUST00000218686 Speer4bQ9D9F7 267 aa29.84■■■□□ 2.37
Trappc6b-207ENSMUST00000218686 Casz1Q9CWL2 1761 aa29.82■■■□□ 2.36
Trappc6b-207ENSMUST00000218686 Scaf1Q5U4C3 1256 aaKnown RBP29.81■■■□□ 2.36
Trappc6b-207ENSMUST00000218686 Ccne1Q61457 408 aa29.79■■■□□ 2.36
Trappc6b-207ENSMUST00000218686 UtrnE9Q6R7 3430 aa29.78■■■□□ 2.36
Trappc6b-207ENSMUST00000218686 Sned1Q70E20 1403 aa29.77■■■□□ 2.36
Trappc6b-207ENSMUST00000218686 Birc3O08863 600 aa29.75■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Larp1Q6ZQ58 1072 aaKnown RBP29.75■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 ApobrQ8VBT6 942 aa29.75■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Bicdl1A0JNT9 577 aa29.74■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 NppbP40753 121 aa29.73■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Sin3aQ60520 1274 aaKnown RBP29.73■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Sumf1Q8R0F3 372 aa29.72■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Spon1Q8VCC9 807 aa29.71■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Aplp2Q06335 707 aa29.7■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 Camkk2Q8C078 588 aa29.7■■■□□ 2.35
Trappc6b-207ENSMUST00000218686 PappaQ8R4K8 1624 aa29.7■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Simc1E9Q6E9 1354 aa29.67■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Kiaa1107Q80TK0 1369 aa29.67■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Ccnl1Q52KE7 532 aaKnown RBP29.67■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Cyp2c69E9PXC3 491 aa29.66■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Cyp2c40P56657 491 aa29.66■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 4930572O03RikQ8C5Y0 211 aa29.66■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Parp14Q2EMV9 1817 aa29.65■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 CoblQ5NBX1 1337 aaKnown RBP29.65■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 Plch1Q4KWH5 1682 aa29.64■■■□□ 2.34
Trappc6b-207ENSMUST00000218686 ThemisQ8BGW0 636 aa29.63■■■□□ 2.33
Trappc6b-207ENSMUST00000218686 Ppp1r37Q8BKR5 712 aa29.62■■■□□ 2.33
Trappc6b-207ENSMUST00000218686 Ubr3Q5U430 1889 aa29.61■■■□□ 2.33
Trappc6b-207ENSMUST00000218686 Col11a2Q64739 1736 aa29.59■■■□□ 2.33
Trappc6b-207ENSMUST00000218686 Tmf1B9EKI3 1091 aa29.57■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 SnrkQ8VDU5 748 aa29.57■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Taf1dQ9D4V4 322 aa29.57■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Spata31d1bE9QA57 1361 aa29.55■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Gm13023A2A8N2 498 aa29.55■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 ArsiQ32KI9 573 aa29.55■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 FktnQ8R507 461 aa29.54■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Itgb4A2A863 1818 aa29.53■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Tgfb2P27090 414 aa29.53■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Plekhg5Q66T02 1073 aa29.53■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Kdm6aO70546 1401 aa29.53■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Akap2O54931 893 aa29.52■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Tjp1P39447 1745 aaKnown RBP29.51■■■□□ 2.32
Trappc6b-207ENSMUST00000218686 Cyp2c67Q569X9 491 aa29.51■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Megf6Q80V70 1572 aa29.51■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 CpzQ8R4V4 654 aa29.5■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Crb1Q8VHS2 1405 aa29.5■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 ClspnQ80YR7 1315 aa29.49■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Slc4a1apE9PX68 744 aa29.49■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Podxl2Q8CAE9 603 aa29.49■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Hdac6Q9Z2V5 1149 aa29.49■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 ScaperF8VQ70 1398 aaKnown RBP29.49■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Tns2Q8CGB6 1400 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Gm21663A0A0G2JE01 267 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Gm7361D3Z6R1 267 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 5031410I06RikE9Q4E0 267 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Gm1979E9QAN3 267 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Gm5862K7N5V5 267 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Gm10220K7N660 267 aa29.48■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Togaram1Q6A070 1776 aaKnown RBP29.47■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Rad17Q6NXW6 688 aa29.47■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Trpm3Q5F4S9 1721 aa29.47■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Hoxb7P09024 217 aa29.46■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Slc24a1Q91WD8 1130 aa29.46■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Smarcc1P97496 1104 aa29.45■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 VwdeQ6DFV8 926 aa29.45■■■□□ 2.31
Trappc6b-207ENSMUST00000218686 Msh6P54276 1358 aaKnown RBP29.44■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 PrxO55103 1391 aa29.43■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Eya1P97767 591 aa29.41■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Slc5a1Q8C3K6 665 aa29.41■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Eif3bQ8JZQ9 803 aaKnown RBP29.41■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Cyp2c68K7N6C2 491 aa29.4■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Gtpbp6Q3U6U5 514 aa29.4■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 TrhQ62361 256 aa29.4■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Aebp2Q9Z248 504 aaKnown RBP29.4■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 C4bP01029 1738 aa29.39■■■□□ 2.3
Trappc6b-207ENSMUST00000218686 Tlr8P58682 1032 aa29.38■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 Ints5Q8CHT3 1018 aa29.38■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 Pank3Q8R2W9 370 aa29.38■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 Atg3Q9CPX6 314 aa29.37■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 IbtkQ6ZPR6 1352 aaKnown RBP29.37■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 NogP97466 232 aa29.36■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 1810065E05RikQ5NC41 235 aa29.36■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 Miga2Q8BK03 593 aa29.35■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 Upf1Q9EPU0 1124 aaKnown RBP29.35■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 StrcQ8VIM6 1809 aa29.34■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 Asic4Q7TNS7 539 aa29.33■■■□□ 2.29
Trappc6b-207ENSMUST00000218686 B4galnt4Q766D5 1034 aa29.32■■■□□ 2.28
Trappc6b-207ENSMUST00000218686 Nedd4P46935 887 aaKnown RBP29.29■■■□□ 2.28
Trappc6b-207ENSMUST00000218686 Jmjd4Q8BFT6 427 aa29.29■■■□□ 2.28
Trappc6b-207ENSMUST00000218686 RtcbQ99LF4 505 aaKnown RBP29.29■■■□□ 2.28
Trappc6b-207ENSMUST00000218686 Inpp5dQ9ES52 1191 aa29.29■■■□□ 2.28
Trappc6b-207ENSMUST00000218686 Wdr66E9Q743 1299 aa29.28■■■□□ 2.28
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms