RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Kdm5aQ3UXZ9 1690 aa17.87■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Stag3O70576 1240 aa17.87■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Kcnf1Q7TSH7 493 aa17.87■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Mdc1Q5PSV9 1707 aa17.87■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Dnajc5P60904 198 aa17.86■□□□□ 0.45
Ebf3-208ENSMUST00000210774 G3bp1P97855 465 aaKnown RBP17.86■□□□□ 0.45
Ebf3-208ENSMUST00000210774 ErbinQ80TH2 1402 aa17.86■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Mcm3P25206 812 aaKnown RBP17.86■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Abca6Q8K441 1624 aa17.86■□□□□ 0.45
Ebf3-208ENSMUST00000210774 CastP51125 788 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Mmel1Q9JLI3 765 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Iqgap3F8VQ29 1632 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Gm45140A0A0N4SUM8 220 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Ppp1r18Q8BQ30 594 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Rsph4aQ8BYM7 716 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 IqubQ8CDK3 788 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Abca8aQ8K442 1620 aa17.85■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Lcmt1A0A0U1RNF2 332 aa17.84■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Oas2E9Q9A9 742 aa17.84■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Tomm22Q9CPQ3 142 aa17.84■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Phactr2B1AVP0 632 aa17.84■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Puf60Q3UEB3 564 aaKnown RBP17.84■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Samm50Q8BGH2 469 aa17.84■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Tulp4Q9JIL5 1547 aa17.83■□□□□ 0.45
Ebf3-208ENSMUST00000210774 Tmx1Q8VBT0 278 aa17.83■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Ppp6r3Q922D4 844 aa17.83■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Smarca5Q91ZW3 1051 aaKnown RBP17.82■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Talpid3E9PV87 1520 aa17.82■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Babam1Q3UI43 333 aa17.82■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Cetn4Q8K4K1 168 aa17.82■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Abcc6Q9R1S7 1498 aa17.82■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Efcab6Q6P1E8 1516 aa17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 FanclQ9CR14 375 aa17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Zbtb22Q9Z0G7 638 aa17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Brpf1B2RRD7 1212 aa17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Utp14aQ640M1 767 aaKnown RBP17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 NexnQ7TPW1 607 aa17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 RictorQ6QI06 1708 aa17.81■□□□□ 0.44
Ebf3-208ENSMUST00000210774 LifrP42703 1092 aa17.8■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Arhgap4B1AUY3 965 aa17.8■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Gm973E9Q295 1059 aa17.8■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Pdia3P27773 505 aaKnown RBP17.8■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Tbc1d8Q9Z1A9 1134 aa17.8■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Taf3Q5HZG4 932 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Dixdc1Q80Y83 711 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Gm45015A0A140LII9 184 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Gm18336A0A140LIU8 765 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Adamtsl3G3UXC7 1706 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Nucb2P81117 420 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Q3UPC7 1272 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Nlrp3Q8R4B8 1033 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 CenppQ9CZ92 286 aa17.79■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Trim27Q62158 513 aa17.78■□□□□ 0.44
Ebf3-208ENSMUST00000210774 CtifQ6PEE2 600 aaKnown RBP17.78■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Nucb1Q02819 459 aaKnown RBP17.78■□□□□ 0.44
Ebf3-208ENSMUST00000210774 EappQ5BU09 281 aa17.78■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Q9D2X8 372 aa17.78■□□□□ 0.44
Ebf3-208ENSMUST00000210774 IbtkQ6ZPR6 1352 aaKnown RBP17.78■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Ehbp1l1Q99MS7 1716 aa17.77■□□□□ 0.44
Ebf3-208ENSMUST00000210774 EzrP26040 586 aaKnown RBP17.77■□□□□ 0.44
Ebf3-208ENSMUST00000210774 Ddx41Q91VN6 622 aaKnown RBP17.77■□□□□ 0.44
Ebf3-208ENSMUST00000210774 AatkQ80YE4 1365 aa17.77■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Zkscan16A2ALW2 728 aa17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Brpf3B2KF05 1204 aaKnown RBP17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Arhgap23Q69ZH9 1483 aa17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Polr3gQ6NXY9 223 aa17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Nol11Q8BJW5 723 aaKnown RBP17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Zfp51Q3U4L8 781 aa17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 PtmsQ9D0J8 101 aaKnown RBP17.76■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Map7d2A2AG50 781 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Cfap73J3QPZ5 306 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Wwc1Q5SXA9 1104 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Zfp397Q7TNK4 527 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Nrbp1Q99J45 535 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Cdkn1cP49919 348 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Snx13Q6PHS6 957 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 BbxQ8VBW5 907 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Iqsec2Q5DU25 1478 aa17.75■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Adgrb3Q80ZF8 1522 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Triml2E9PW10 424 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Ica1lQ3TY65 431 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Qser1A2BIE1 1698 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 NpatQ8BMA5 1420 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Tshz3Q8CGV9 1081 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 CenpqQ9CPQ5 267 aa17.74■□□□□ 0.43
Ebf3-208ENSMUST00000210774 AU022751B1B0V2 589 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Serpinb6bO08804 377 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Eif4g2Q62448 906 aaKnown RBP17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Adam1bQ8R534 806 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 MvpQ9EQK5 861 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 AatfQ9JKX4 526 aaKnown RBP17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Plekhm2Q80TQ5 1018 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Afap1Q80YS6 731 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Knl1Q66JQ7 1612 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Fam184aE9PW83 1143 aa17.73■□□□□ 0.43
Ebf3-208ENSMUST00000210774 NmiO35309 314 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 U2surpQ6NV83 1029 aaKnown RBP17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Filip1lQ6P6L0 1131 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Oxsr1Q6P9R2 527 aa17.72■□□□□ 0.43
Ebf3-208ENSMUST00000210774 Zkscan5Q9Z1D8 819 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms