RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Otud6bQ8K2H2 294 aa17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 Apbb1ipQ8R5A3 670 aa17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 KarsQ99MN1 595 aaKnown RBP17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 CenpqQ9CPQ5 267 aa17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 Naip5Q9R016 1403 aa17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 Rbm27Q5SFM8 1060 aaKnown RBP17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 Nsfl1cQ9CZ44 370 aaKnown RBP17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 Zc3h4Q6ZPZ3 1304 aaKnown RBP17.51■□□□□ 0.39
Syn1-202ENSMUST00000115345 Irx1P81068 480 aa17.5■□□□□ 0.39
Syn1-202ENSMUST00000115345 Kdm4aQ8BW72 1064 aa17.5■□□□□ 0.39
Syn1-202ENSMUST00000115345 EcsitQ9QZH6 435 aa17.5■□□□□ 0.39
Syn1-202ENSMUST00000115345 Trim58Q5NCC9 485 aa17.49■□□□□ 0.39
Syn1-202ENSMUST00000115345 Pip4k2bQ80XI4 416 aa17.49■□□□□ 0.39
Syn1-202ENSMUST00000115345 Wdr60Q8C761 999 aa17.49■□□□□ 0.39
Syn1-202ENSMUST00000115345 Atg3Q9CPX6 314 aa17.49■□□□□ 0.39
Syn1-202ENSMUST00000115345 Rfx1P48377 963 aa17.48■□□□□ 0.39
Syn1-202ENSMUST00000115345 Hvcn1Q3U2S8 269 aa17.48■□□□□ 0.39
Syn1-202ENSMUST00000115345 Adgrb2Q8CGM1 1561 aa17.48■□□□□ 0.39
Syn1-202ENSMUST00000115345 ImpactO55091 318 aa17.48■□□□□ 0.39
Syn1-202ENSMUST00000115345 Cfdp1O88271 295 aaKnown RBP17.48■□□□□ 0.39
Syn1-202ENSMUST00000115345 Rnf214Q8BFU3 668 aaKnown RBP17.48■□□□□ 0.39
Syn1-202ENSMUST00000115345 Rnaseh1O70338 285 aa17.47■□□□□ 0.39
Syn1-202ENSMUST00000115345 Klra9Q2TJJ8 266 aa17.47■□□□□ 0.39
Syn1-202ENSMUST00000115345 Spout1Q3UHX9 385 aaKnown RBP17.47■□□□□ 0.39
Syn1-202ENSMUST00000115345 Klra10Q9R1G6 266 aa17.47■□□□□ 0.39
Syn1-202ENSMUST00000115345 Iqsec2Q5DU25 1478 aa17.47■□□□□ 0.39
Syn1-202ENSMUST00000115345 Abcc6Q9R1S7 1498 aa17.47■□□□□ 0.39
Syn1-202ENSMUST00000115345 Ttc21aQ8C0S4 1314 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Ankrd35E9Q9D8 996 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Rfc1P35601 1131 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Kmt5bQ3U8K7 883 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Zfp397Q7TNK4 527 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Spata16Q8C636 571 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Spata32Q8C5V0 334 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Ccdc97Q9DBT3 340 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 Kdm3bQ6ZPY7 1562 aa17.46■□□□□ 0.39
Syn1-202ENSMUST00000115345 GzmnQ920S1 248 aa17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Mageb16Q9CWV4 363 aa17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Fam163bQ8BUM6 167 aa17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Rrp7aQ9D1C9 280 aaKnown RBP17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Cwc15Q9JHS9 229 aaKnown RBP17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Acbd5Q5XG73 508 aa17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Cep131Q62036 1060 aa17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Rwdd1Q9CQK7 243 aa17.45■□□□□ 0.38
Syn1-202ENSMUST00000115345 Gli3Q61602 1583 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Cnksr2Q80YA9 1032 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Fsd2Q8BZ52 692 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Vps53Q8CCB4 832 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Abcc5Q9R1X5 1436 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 NefhP19246 1090 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Fam71bQ5STT6 665 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Kif3bQ61771 747 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Bank1Q80VH0 783 aa17.44■□□□□ 0.38
Syn1-202ENSMUST00000115345 Impdh2P24547 514 aa17.43■□□□□ 0.38
Syn1-202ENSMUST00000115345 Ranbp1P34022 203 aaKnown RBP17.43■□□□□ 0.38
Syn1-202ENSMUST00000115345 Sf3b2Q3UJB0 878 aaKnown RBP17.43■□□□□ 0.38
Syn1-202ENSMUST00000115345 Bag4Q8CI61 457 aa17.43■□□□□ 0.38
Syn1-202ENSMUST00000115345 Synpo2Q91YE8 1087 aaKnown RBP17.43■□□□□ 0.38
Syn1-202ENSMUST00000115345 Mtus2Q3UHD3 1353 aa17.43■□□□□ 0.38
Syn1-202ENSMUST00000115345 Plekhh1Q80TI1 1356 aa17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Tmx1Q8VBT0 278 aa17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 SrrtQ99MR6 875 aaKnown RBP17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Adgrl2Q8JZZ7 1487 aa17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Nap1l2P51860 460 aa17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Ralbp1Q62172 648 aa17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Recql4Q75NR7 1216 aaKnown RBP17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Usp54Q8BL06 1588 aaKnown RBP17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 Plekhh2Q8C115 1491 aa17.42■□□□□ 0.38
Syn1-202ENSMUST00000115345 1700019A02RikA0A087WPV9 146 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Ppp2r3aB2RXC8 1150 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Cct2P80314 535 aaKnown RBP17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Cwc27Q3TKY6 469 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Plagl1Q9JLQ4 704 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Myo5cE9Q1F5 1742 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Rock2P70336 1388 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Scp2P32020 547 aaKnown RBP17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Q32P12 615 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Bicd2Q921C5 820 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Chd1lQ9CXF7 900 aa17.41■□□□□ 0.38
Syn1-202ENSMUST00000115345 Rims2Q9EQZ7 1530 aa17.4■□□□□ 0.38
Syn1-202ENSMUST00000115345 Vil1Q62468 827 aa17.4■□□□□ 0.38
Syn1-202ENSMUST00000115345 Brsk2Q69Z98 735 aa17.39■□□□□ 0.38
Syn1-202ENSMUST00000115345 Adcy2Q80TL1 1090 aa17.39■□□□□ 0.38
Syn1-202ENSMUST00000115345 Scaf11E9PZM7 1456 aaKnown RBP17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 Tpm3P21107 285 aaKnown RBP17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 GclcP97494 637 aa17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 GphnQ8BUV3 769 aaKnown RBP17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 Fam53cQ8BXQ8 393 aa17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 Rbm33Q9CXK9 1231 aaKnown RBP17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 AlkP97793 1621 aa17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 Syce3B5KM66 88 aa17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 Armcx6Q8K3A6 301 aa17.39■□□□□ 0.37
Syn1-202ENSMUST00000115345 Gemin5Q8BX17 1502 aaKnown RBP17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Adamts7Q68SA9 1657 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Gm9992B2RWK3 458 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Unc93aQ710D3 458 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Smc4Q8CG47 1286 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Nucb2P81117 420 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Kif2cQ922S8 721 aa17.38■□□□□ 0.37
Syn1-202ENSMUST00000115345 Sh3gl3Q62421 347 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms