RNA–Protein interactions for RNA: ENSMUST00000048782.6

Trem1-201, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trem1, Length 2,993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-201ENSMUST00000048782 Ccdc94Q9D6J3 314 aa12.7□□□□□ -0.38
Trem1-201ENSMUST00000048782 U2af1Q9D883 239 aaKnown RBP12.7□□□□□ -0.38
Trem1-201ENSMUST00000048782 Rimbp3Q3V0F0 1606 aa12.7□□□□□ -0.38
Trem1-201ENSMUST00000048782 Scn7aB1AYL1 1681 aa12.7□□□□□ -0.38
Trem1-201ENSMUST00000048782 CatipB9EKE5 520 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Gcc1Q9D4H2 778 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 MvpQ9EQK5 861 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 G3bp1P97855 465 aaKnown RBP12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Fam43aQ8BUP8 424 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 HnrnpuQ8VEK3 800 aaKnown RBP12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Ppp1r15aP17564 657 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Psme1P97371 249 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Mindy4Q3UQI9 744 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Gzf1Q4VBD9 706 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Pnma3Q8JZW8 466 aa12.69□□□□□ -0.38
Trem1-201ENSMUST00000048782 Cdk12Q14AX6 1484 aaKnown RBP12.68□□□□□ -0.38
Trem1-201ENSMUST00000048782 Zfp91Q62511 572 aa12.68□□□□□ -0.38
Trem1-201ENSMUST00000048782 Tfip11Q9ERA6 838 aaKnown RBP12.68□□□□□ -0.38
Trem1-201ENSMUST00000048782 Slit2Q9R1B9 1521 aa12.68□□□□□ -0.38
Trem1-201ENSMUST00000048782 Apaf1O88879 1249 aa12.68□□□□□ -0.38
Trem1-201ENSMUST00000048782 Ppp1r3fQ9JIG4 799 aa12.68□□□□□ -0.38
Trem1-201ENSMUST00000048782 Anp32cQ64G17 123 aa12.67□□□□□ -0.38
Trem1-201ENSMUST00000048782 Stk26Q99JT2 416 aa12.67□□□□□ -0.38
Trem1-201ENSMUST00000048782 Rasa1E9PYG6 1038 aa12.67□□□□□ -0.38
Trem1-201ENSMUST00000048782 Ccdc60Q8C4J0 545 aa12.67□□□□□ -0.38
Trem1-201ENSMUST00000048782 Col16a1Q8BLX7 1580 aa12.67□□□□□ -0.38
Trem1-201ENSMUST00000048782 Cavin2Q63918 418 aaKnown RBP12.66□□□□□ -0.38
Trem1-201ENSMUST00000048782 Ankrd44B2RXR6 993 aa12.66□□□□□ -0.38
Trem1-201ENSMUST00000048782 Rcan3Q9JKK0 239 aa12.66□□□□□ -0.38
Trem1-201ENSMUST00000048782 Fam184aE9PW83 1143 aa12.66□□□□□ -0.38
Trem1-201ENSMUST00000048782 Gtf3c5Q8R2T8 520 aa12.66□□□□□ -0.38
Trem1-201ENSMUST00000048782 CarsQ9ER72 831 aaKnown RBP12.66□□□□□ -0.38
Trem1-201ENSMUST00000048782 Abcc10Q8R4P9 1501 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Kif4P33174 1231 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Ppip5k2Q6ZQB6 1129 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Gripap1Q8VD04 806 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Atp1b4Q99ME6 356 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Nek4Q9Z1J2 792 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Ptpn23Q6PB44 1692 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Cnga1P29974 684 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Kiaa0753Q6A000 959 aa12.65□□□□□ -0.38
Trem1-201ENSMUST00000048782 Hoxa7P02830 229 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Tbc1d30Q69ZT9 766 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Txndc2Q6P902 515 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Mrps27Q8BK72 415 aaKnown RBP12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Zscan25B2RX31 543 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 MsnP26041 577 aaKnown RBP12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Fbxo2Q80UW2 297 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Grpel1Q99LP6 217 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Trim26Q99PN3 545 aa12.64□□□□□ -0.39
Trem1-201ENSMUST00000048782 Q3UPC7 1272 aa12.63□□□□□ -0.39
Trem1-201ENSMUST00000048782 Ubr1O70481 1757 aa12.63□□□□□ -0.39
Trem1-201ENSMUST00000048782 Eif4g2Q62448 906 aaKnown RBP12.63□□□□□ -0.39
Trem1-201ENSMUST00000048782 Aldh1l2Q8K009 923 aa12.63□□□□□ -0.39
Trem1-201ENSMUST00000048782 Swt1Q9DBQ9 907 aa12.62□□□□□ -0.39
Trem1-201ENSMUST00000048782 Pik3c2aQ61194 1686 aa12.62□□□□□ -0.39
Trem1-201ENSMUST00000048782 Nucb1Q02819 459 aaKnown RBP12.62□□□□□ -0.39
Trem1-201ENSMUST00000048782 Adam1bQ8R534 806 aa12.62□□□□□ -0.39
Trem1-201ENSMUST00000048782 Cyp27a1Q9DBG1 533 aa12.62□□□□□ -0.39
Trem1-201ENSMUST00000048782 Thsd7aQ69ZU6 1645 aa12.62□□□□□ -0.39
Trem1-201ENSMUST00000048782 EzrP26040 586 aaKnown RBP12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Trim27Q62158 513 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 GphnQ8BUV3 769 aaKnown RBP12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Gm9992B2RWK3 458 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Atp6v1dP57746 247 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Unc93aQ710D3 458 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Plekhm2Q80TQ5 1018 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Gys2Q8VCB3 704 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Ppp6r3Q922D4 844 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 SrrtQ99MR6 875 aaKnown RBP12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Nsd3Q6P2L6 1439 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 Topaz1E5FYH1 1653 aa12.61□□□□□ -0.39
Trem1-201ENSMUST00000048782 GorabQ8BRM2 368 aa12.6□□□□□ -0.39
Trem1-201ENSMUST00000048782 Dhx30Q99PU8 1217 aaKnown RBP12.6□□□□□ -0.39
Trem1-201ENSMUST00000048782 Trpm3Q5F4S9 1721 aa12.6□□□□□ -0.39
Trem1-201ENSMUST00000048782 Sos1Q62245 1319 aa12.6□□□□□ -0.39
Trem1-201ENSMUST00000048782 Klhl34A2AI76 644 aa12.6□□□□□ -0.39
Trem1-201ENSMUST00000048782 Chd4Q6PDQ2 1915 aaKnown RBP12.59□□□□□ -0.39
Trem1-201ENSMUST00000048782 IghaA0A0A6YXW6 389 aa12.59□□□□□ -0.39
Trem1-201ENSMUST00000048782 Irx4Q9QY61 515 aa12.59□□□□□ -0.39
Trem1-201ENSMUST00000048782 Ythdc1E9Q5K9 736 aaKnown RBP12.59□□□□□ -0.39
Trem1-201ENSMUST00000048782 Chrna2Q91X60 512 aa12.59□□□□□ -0.39
Trem1-201ENSMUST00000048782 Pank2Q3U4S0 443 aa12.58□□□□□ -0.4
Trem1-201ENSMUST00000048782 Q4VA45 678 aa12.58□□□□□ -0.4
Trem1-201ENSMUST00000048782 Inpp5bQ8K337 993 aa12.58□□□□□ -0.4
Trem1-201ENSMUST00000048782 Camta1A2A891 1682 aa12.58□□□□□ -0.4
Trem1-201ENSMUST00000048782 Tpm3P21107 285 aaKnown RBP12.58□□□□□ -0.4
Trem1-201ENSMUST00000048782 Gm45015A0A140LII9 184 aa12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Gm18336A0A140LIU8 765 aa12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Hvcn1Q3U2S8 269 aa12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Syce3B5KM66 88 aa12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Zdhhc9P59268 364 aa12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Ncbp1Q3UYV9 790 aaKnown RBP12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Q3UJC8 639 aa12.57□□□□□ -0.4
Trem1-201ENSMUST00000048782 Phlpp1Q8CHE4 1687 aa12.56□□□□□ -0.4
Trem1-201ENSMUST00000048782 Rtf1A2AQ19 715 aaKnown RBP12.56□□□□□ -0.4
Trem1-201ENSMUST00000048782 Gnai1B2RSH2 354 aa12.56□□□□□ -0.4
Trem1-201ENSMUST00000048782 Smarce1O54941 411 aaKnown RBP12.56□□□□□ -0.4
Trem1-201ENSMUST00000048782 Pdia3P27773 505 aaKnown RBP12.56□□□□□ -0.4
Trem1-201ENSMUST00000048782 Dmrtc1Q9D9R7 182 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms