RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ric3Q8BPM6 367 aa21.61■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Rab11fip3Q8CHD8 1047 aa21.61■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Smarca5Q91ZW3 1051 aaKnown RBP21.61■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Ptgs1P22437 602 aa21.6■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Gm45140A0A0N4SUM8 220 aa21.6■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Cavin2Q63918 418 aaKnown RBP21.6■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Q9D2X8 372 aa21.6■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 MarsQ68FL6 902 aaKnown RBP21.59■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Aldh1l2Q8K009 923 aa21.58■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Gtf3c5Q8R2T8 520 aa21.58■■□□□ 1.05
Sqstm1-201ENSMUST00000015981 Cavin1O54724 392 aa21.58■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Tm6sf1P58749 370 aa21.58■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Cbx1P83917 185 aaKnown RBP21.58■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Hvcn1Q3U2S8 269 aa21.58■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Scaf1Q5U4C3 1256 aaKnown RBP21.58■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Usp16Q99LG0 825 aa21.57■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Ptch1Q61115 1434 aa21.57■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Kank4Q6P9J5 1016 aa21.56■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Fam184aE9PW83 1143 aa21.56■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Tbc1d30Q69ZT9 766 aa21.56■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 St18Q80TY4 1045 aa21.56■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Stk26Q99JT2 416 aa21.56■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Rnf123Q5XPI3 1314 aa21.55■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Filip1lQ6P6L0 1131 aa21.55■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Zfp251Q6PCX8 632 aa21.55■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Nol11Q8BJW5 723 aaKnown RBP21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Lemd3Q9WU40 921 aa21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Cyp46a1Q9WVK8 500 aa21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Rtf1A2AQ19 715 aaKnown RBP21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Vgll3P85442 326 aa21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Cpa2Q504N0 417 aa21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Trim28Q62318 834 aa21.54■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 U2surpQ6NV83 1029 aaKnown RBP21.53■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Rbm42Q91V81 474 aaKnown RBP21.53■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 TimelessQ9R1X4 1197 aa21.53■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Chmp4cQ9D7F7 232 aa21.53■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Kif24Q6NWW5 1356 aa21.53■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Atg4a-psA0A0G2JFS9 396 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Atp6v1dP57746 247 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Adcy5P84309 1262 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Atg4aQ8C9S8 396 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 LlphQ9D945 130 aaKnown RBP21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Tecpr2Q3UH45 1423 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Atp2b3Q0VF55 1220 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Casc1Q6TDU8 730 aa21.52■■□□□ 1.04
Sqstm1-201ENSMUST00000015981 Lmod3E9QA62 571 aa21.52■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Mx2Q9WVP9 655 aa21.52■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 AnlnQ8K298 1121 aaKnown RBP21.51■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Serpina10Q8R121 448 aa21.51■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Ap3b2Q9JME5 1082 aa21.51■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Irx4Q9QY61 515 aa21.51■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Phactr2B1AVP0 632 aa21.51■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 EzrP26040 586 aaKnown RBP21.5■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Mum1Q6DID5 682 aa21.5■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Sos1Q62245 1319 aa21.5■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Gsto1O09131 240 aa21.49■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Atp2b2Q9R0K7 1198 aa21.49■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Prdm2A2A7B5 1709 aaKnown RBP21.49■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Synj2Q9D2G5 1434 aa21.49■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Depdc5P61460 1591 aa21.48■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Aifm3Q3TY86 605 aa21.48■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Topbp1Q6ZQF0 1515 aa21.48■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Ythdc1E9Q5K9 736 aaKnown RBP21.48■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Prkar2bP31324 416 aa21.48■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 CalcaP70160 136 aa21.47■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Bcar3Q9QZK2 820 aa21.47■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 MccE9PWI3 1003 aa21.46■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Klhdc4Q921I2 584 aa21.46■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 EvcP57680 1005 aa21.46■■□□□ 1.03
Sqstm1-201ENSMUST00000015981 Ccar2Q8VDP4 922 aaKnown RBP21.45■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Zfp51Q3U4L8 781 aa21.45■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Ppp1r15aP17564 657 aa21.44■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Prune1Q8BIW1 454 aa21.44■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 SrrtQ99MR6 875 aaKnown RBP21.44■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Cabp2Q9JLK4 216 aa21.44■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Zkscan2G3X952 960 aa21.44■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Smarce1O54941 411 aaKnown RBP21.44■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Akap12Q9WTQ5 1684 aa21.43■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 RestQ8VIG1 1082 aa21.43■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Anapc15P60007 132 aa21.43■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Sass6Q80UK7 654 aa21.43■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Nol12Q8BG17 217 aa21.43■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Pcmtd1P59913 357 aa21.42■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Birc3O08863 600 aa21.42■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Trim30aP15533 496 aa21.42■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Nucb2P81117 420 aa21.42■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Utp3Q9JI13 469 aaKnown RBP21.42■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Nol8Q3UHX0 1147 aaKnown RBP21.41■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 KinQ8K339 391 aa21.41■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Mroh1E0CZ22 1640 aa21.41■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Mcm10Q0VBD2 885 aa21.41■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Arhgap23Q69ZH9 1483 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Gm973E9Q295 1059 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Zhx1P70121 873 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Nxf2Q4ZGD8 691 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Ddx19aQ61655 478 aaKnown RBP21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Phf23Q8BSN5 401 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Atp1b4Q99ME6 356 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Mmel1Q9JLI3 765 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Gpatch11Q3UFS4 262 aa21.4■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms