RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PRSS21Q9Y6M0 314 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 A0A096LPK6 155 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 A0A1W2PQU0 124 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 K7ESM1 405 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 COPEO14579 308 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 POLR3GO15318 223 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 PHGDHO43175 533 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 PYGLP06737 847 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 GSTA1P08263 222 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 COL6A2P12110 1019 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 STMN1P16949 149 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 GMPRP36959 345 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 NSG1P42857 185 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 PGGT1BP53609 377 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 PPP2CBP62714 309 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 PPP2CAP67775 309 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 SIGLEC14Q08ET2 396 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 WSCD2Q2TBF2 565 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 KHDC1Q4VXA5 237 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 LDLRAP1Q5SW96 308 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 ADAMTSL4Q6UY14 1074 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 MAMSTRQ6ZN01 415 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 MACC1Q6ZN28 852 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 CCDC91Q7Z6B0 441 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 TRIM69Q86WT6 500 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 TP53I13Q8NBR0 393 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 OR2T34Q8NGX1 318 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 MDM1Q8TC05 714 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 HEXDCQ8WVB3 486 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 CLPBQ9H078 707 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 KCNK9Q9NPC2 374 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 DLGAP2Q9P1A6 1054 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 GNPTGQ9UJJ9 305 aa14.59□□□□□ -0.07
SHKBP1-211ENST00000595945 H3BMM5 538 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 NIPSNAP2O75323 286 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 SAT1P21673 171 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ACSL1P33121 698 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 RPA3P35244 121 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ATP1A2P50993 1020 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 GYS2P54840 703 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 IRF9Q00978 393 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 MTAPQ13126 283 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ZNF460Q14592 562 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 TAF1BQ53T94 588 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 CWF19L1Q69YN2 538 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ANO7Q6IWH7 933 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 TMEM207Q6UWW9 146 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 FAM124AQ86V42 546 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 LCA5Q86VQ0 697 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 CENPLQ8N0S6 344 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 PLD6Q8N2A8 252 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 PLA2G15Q8NCC3 412 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 LKAAEAR1Q8TD35 194 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 TCP10LQ8TDR4 215 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 KCNJ9Q92806 393 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 EDAQ92838 391 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 COX14Q96I36 57 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 HHIPQ96QV1 700 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC17A9Q9BYT1 436 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 BTBD1Q9H0C5 482 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 VPS11Q9H270 941 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 CCDC68Q9H2F9 335 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 LATS2Q9NRM7 1088 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 DCDC2Q9UHG0 476 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ACOT9Q9Y305 439 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 PLLPQ9Y342 182 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 SIT1Q9Y3P8 196 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ZFC3H1O60293 1989 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 KNL1Q8NG31 2342 aa14.58□□□□□ -0.08
SHKBP1-211ENST00000595945 ABCA7Q8IZY2 2146 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3DA0A087WVF3 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3IA0A087WXS9 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3EA0A087X179 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 A0A087X1B8 175 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3KA0A087X1G2 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3FA6NER0 549 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 LRRC72A6NJI9 287 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3LB9A6J9 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TM9SF1O15321 606 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SGTAO43765 313 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 GLRA3O75311 464 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 RHOBTB1O94844 696 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 AP2A2O94973 939 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 ZWINTO95229 277 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 APBB3O95704 486 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TOP3BO95985 862 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3HP0C7X1 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 DHRS4L1P0CG22 281 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 CHN1P15882 459 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 OXTRP30559 389 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TRIM23P36406 574 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC26A3P40879 764 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 ETV4P43268 484 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 MAGEA9P43362 315 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 GPR1P46091 355 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 CCT5P48643 541 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 CLCN7P51798 805 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC12A2P55011 1212 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms