RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 BLOC1S5Q8TDH9 187 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 HNRNPLLQ8WVV9 542 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GLYATL1Q969I3 302 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF578Q96N58 590 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SPATA13Q96N96 652 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMEM74Q96NL1 305 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PPP1R2P1Q96PQ5 205 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PLEKHG4BQ96PX9 1271 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FSD1LQ9BXM9 530 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 OR2AG1Q9H205 316 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SYNDIG1Q9H7V2 258 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ARFGAP3Q9NP61 516 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IL17CQ9P0M4 197 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PRKAB1Q9Y478 270 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF106Q9H2Y7 1883 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TRBV23OR9-2A0A075B6M9 112 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 A0A087WV48 116 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CCDC187A0A096LP49 1063 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 C2orf81A6NN90 581 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GPR89AB7ZAQ6 455 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 RRP8O43159 456 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 VEGFDO43915 354 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PPFIA2O75334 1257 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DXOO77932 396 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GPR89BP0CG08 455 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF8P17098 575 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PSMB4P28070 264 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ALDH4A1P30038 563 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ADRA1AP35348 466 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 EIF2S3P41091 472 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CHRNA4P43681 627 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 INHBCP55103 352 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 MAZP56270 477 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 OR1D5P58170 312 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ERVPABLB-1P60509 514 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KLF1Q13351 362 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CLPPQ16740 277 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PARP6Q2NL67 630 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TBC1D25Q3MII6 688 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ATP13A5Q4VNC0 1218 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF648Q5T619 568 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 C19orf48Q6RUI8 117 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IGF2-ASQ6U949 168 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LRRC69Q6ZNQ3 347 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF662Q6ZS27 426 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF438Q7Z4V0 828 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SPRED1Q7Z699 444 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PIM3Q86V86 326 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CCDC110Q8TBZ0 833 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PATE1Q8WXA2 126 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LRRC45Q96CN5 670 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC46A1Q96NT5 459 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 VPS35Q96QK1 796 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GORASP1Q9BQQ3 440 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FICDQ9BVA6 458 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 STRADBQ9C0K7 418 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IL26Q9NPH9 171 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ATXN7L1Q9ULK2 861 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SATB2Q9UPW6 733 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PKP3Q9Y446 797 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PCYT1BQ9Y5K3 369 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CAPN6Q9Y6Q1 641 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BPTFQ12830 3046 aa9.62□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TCRBV7S2A1N4TA0A589 114 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 OR5K4A6NMS3 321 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 D6RAR5 112 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CHUKO15111 745 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KMOO15229 486 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PPM1DO15297 605 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 STX7O15400 261 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PSMD3O43242 534 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CDK14O94921 469 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CPNE6O95741 557 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ACP5P13686 325 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC2A4P14672 509 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LPOP22079 712 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CD1CP29017 333 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 STIP1P31948 543 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CCKBRP32239 447 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SPAM1P38567 509 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CLCNKAP51800 687 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZFP36L1Q07352 338 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMEM115Q12893 351 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SQSTM1Q13501 440 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 NR1D2Q14995 579 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 RPS6KA1Q15418 735 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TAF1AQ15573 450 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CHRNA6Q15825 494 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AMZ1Q400G9 498 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 C3orf38Q5JPI3 329 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SEL1L2Q5TEA6 688 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 MEI1Q5TIA1 1274 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IYDQ6PHW0 289 aa9.61□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ARHGEF18Q6ZSZ5 1173 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms