RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NLRP8Q86W28 1048 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 GALNT16Q8N428 558 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 ZNF808Q8N4W9 903 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 GPT2Q8TD30 523 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 RXFP2Q8WXD0 754 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 UBXN4Q92575 508 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 CENPIQ92674 756 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 SLX1AQ9BQ83 275 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 MLPHQ9BV36 600 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 CINPQ9BW66 212 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 RAB33BQ9H082 229 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 ZNF624Q9P2J8 865 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 AJAP1Q9UKB5 411 aaPredicted RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 NOVA2Q9UNW9 492 aaKnown RBP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 PCDHGC4Q9Y5F7 938 aa13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.63□□□□□ -0.23
NKX3-1-202ENST00000523261 MAP1AP78559 2803 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 A0A1W2PQ67 120 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 TTC24A2A3L6 582 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 MEN1O00255 615 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 KLHL41O60662 606 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SOCS5O75159 536 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 IPO13O94829 963 aaKnown RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 ZNF202O95125 648 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 JCHAINP01591 159 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 PYGLP06737 847 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 PNMA6AP0CW24 399 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 CD99P14209 185 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 DRD2P14416 443 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SLC9A1P19634 815 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SDC4P31431 198 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 PTPN9P43378 593 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 GSDMDP57764 484 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 PLEKHS1Q5SXH7 462 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 DUS1LQ6P1R4 473 aaKnown RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 FAM198BQ6UWH4 519 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 ZNF765Q7L2R6 523 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 TMEM126BQ8IUX1 230 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 PHYKPLQ8IUZ5 450 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 EXD1Q8NHP7 514 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 C14orf79Q96F83 325 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SCRN2Q96FV2 425 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 CCDC120Q96HB5 630 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 CELF6Q96J87 481 aaKnown RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 WDR77Q9BQA1 342 aaPredicted RBP13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SEC16AO15027 2179 aa13.62□□□□□ -0.23
NKX3-1-202ENST00000523261 SPTBP11277 2137 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 FOXN3O00409 490 aaPredicted RBP13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 PSMA7O14818 248 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 CREB3O43889 395 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 TSFMP43897 325 aaKnown RBP13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 PAPOLAP51003 745 aaKnown RBP13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 CLCNKAP51800 687 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 TTI2Q6NXR4 508 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 SLFN11Q7Z7L1 901 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 MRGPREQ86SM8 312 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 TRIM48Q8IWZ4 208 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 CLEC1AQ8NC01 280 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 RMI1Q9H9A7 625 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 KCND1Q9NSA2 647 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 CNOT6Q9ULM6 557 aaKnown RBP13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 SIK3Q9Y2K2 1263 aa13.61□□□□□ -0.23
NKX3-1-202ENST00000523261 C2CD4BA6NLJ0 364 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 JRKO75564 520 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 RORAP35398 523 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 TUBB4BP68371 445 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 TUBB2AQ13885 445 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 GPR18Q14330 331 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 DCAF10Q5QP82 559 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 PRAMEF17Q5VTA0 474 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 LRRC66Q68CR7 880 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 JOSD2Q8TAC2 188 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 SNX21Q969T3 373 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 ZNF501Q96CX3 271 aaPredicted RBP13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 DHTKD1Q96HY7 919 aaPredicted RBP13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 PCMTD1Q96MG8 357 aaPredicted RBP13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 AGAP3Q96P47 875 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 GSDMAQ96QA5 445 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 PSKH2Q96QS6 385 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 TUBB2BQ9BVA1 445 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
NKX3-1-202ENST00000523261 ARHGAP42A6NI28 874 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms