RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	ZNF765	Q7L2R6	523 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SPRED1	Q7Z699	444 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	TAF8	Q7Z7C8	310 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	NLRP8	Q86W28	1048 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	NRROS	Q86YC3	692 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	CCNJL	Q8IV13	435 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	RAVER1	Q8IY67	606 aa	Known RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	ARL14	Q8N4G2	192 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	DNAAF3	Q8N9W5	541 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SLC39A7	Q92504	469 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	CCDC97	Q96F63	343 aa	Predicted RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	WBP1	Q96G27	269 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SCARF2	Q96GP6	870 aa	Predicted RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	TMEM74	Q96NL1	305 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	OSBPL9	Q96SU4	736 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	NAP1L3	Q99457	506 aa	Predicted RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	GORASP1	Q9BQQ3	440 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	AP1M1	Q9BXS5	423 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SYNDIG1	Q9H7V2	258 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	LRRC40	Q9H9A6	602 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	ARFGAP3	Q9NP61	516 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	RAD18	Q9NS91	495 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	PIH1D1	Q9NWS0	290 aa	Known RBP	12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SMARCAL1	Q9NZC9	954 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	HACD3	Q9P035	362 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	SLC17A4	Q9Y2C5	497 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	TMEM98	Q9Y2Y6	226 aa		12.6	□□□□□ -0.39
FDPS-204	ENST00000461507	GOLGA6L10	A0A0M3HER8	536 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	ERVH48-1	M5A8F1	160 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	PLD2	O14939	933 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	STX7	O15400	261 aa	Known RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	PSMD3	O43242	534 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	TNFSF15	O95150	251 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	GAS8	O95995	478 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	EPO	P01588	193 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	FUCA1	P04066	466 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	IVL	P07476	585 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	STIP1	P31948	543 aa	Known RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	KCNJ1	P48048	391 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	POLD2	P49005	469 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	VPS41	P49754	854 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	INHBC	P55103	352 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	BASP1	P80723	227 aa	Known RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	TMPRSS15	P98073	1019 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	RHD	Q02161	417 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	ZFP36L1	Q07352	338 aa	Known RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	TRIP13	Q15645	432 aa	Predicted RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	OASL	Q15646	514 aa	Known RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	CCNG2	Q16589	344 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	CLPP	Q16740	277 aa	Predicted RBP	12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	FAM151B	Q6UXP7	276 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	ADAMTSL4	Q6UY14	1074 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	SLITRK4	Q8IW52	837 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	SFTPA2	Q8IWL1	248 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	GPR26	Q8NDV2	337 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	FAM46D	Q8NEK8	389 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	CCL4L1	Q8NHW4	92 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	CAPZA3	Q96KX2	299 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	GSDMC	Q9BYG8	508 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	STRADB	Q9C0K7	418 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	TRABD	Q9H4I3	376 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	RAB6B	Q9NRW1	208 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	PAK5	Q9P286	719 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	RNF215	Q9Y6U7	377 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	KALRN	O60229	2985 aa		12.59	□□□□□ -0.39
FDPS-204	ENST00000461507	ZNF462	Q96JM2	2506 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	CCDC78	A2IDD5	438 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	RGSL1	A5PLK6	1076 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	C2orf81	A6NN90	581 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	FADS2P1	A8MWK0	482 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507		B4DGG1	531 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	KLK10	O43240	276 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	SLC25A14	O95258	325 aa	Predicted RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ZSCAN5DP	P0CG00	497 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	BPI	P17213	487 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	TPH1	P17752	444 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A5	P35504	534 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	FDFT1	P37268	417 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	SPAM1	P38567	509 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	B4GALNT1	Q00973	533 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ILF3	Q12906	894 aa	Known RBP eCLIP	12.58	□□□□□ -0.4	4e-8	■■■□□ 18.4
FDPS-204	ENST00000461507	CLN3	Q13286	438 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	BIRC2	Q13490	618 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	SIX1	Q15475	284 aa	Predicted RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	KCTD19	Q17RG1	926 aa	Predicted RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	HENMT1	Q5T8I9	393 aa	Known RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	RAB11FIP2	Q7L804	512 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	TMC3	Q7Z5M5	1100 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	GALNT13	Q8IUC8	556 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	PHYKPL	Q8IUZ5	450 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	C17orf53	Q8N3J3	647 aa	Predicted RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	COG1	Q8WTW3	980 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	PTCD2	Q8WV60	388 aa	Known RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	MAGOHB	Q96A72	148 aa	Known RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	TMEM159	Q96B96	161 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	NAF1	Q96HR8	494 aa	Known RBP	12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ZSCAN5A	Q9BUG6	496 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	ETNK1	Q9HBU6	452 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	CPNE5	Q9HCH3	593 aa		12.58	□□□□□ -0.4
FDPS-204	ENST00000461507	EPB41L5	Q9HCM4	733 aa		12.58	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms