RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 C8orf4Q9NR00 106 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 INTS10Q9NVR2 710 aaKnown RBP17.54■□□□□ 0.4
SNED1-204ENST00000401884 MKS1Q9NXB0 559 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 KCTD5Q9NXV2 234 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 ETAA1Q9NY74 926 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 KIAA1522Q9P206 1035 aaPredicted RBP17.54■□□□□ 0.4
SNED1-204ENST00000401884 N4BP2Q86UW6 1770 aaPredicted RBP17.54■□□□□ 0.4
SNED1-204ENST00000401884 MED26O95402 600 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 FTH1P02794 183 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 PRKCGP05129 697 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 ITPKAP23677 461 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 SLC7A1P30825 629 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 RPIAP49247 311 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 USP46P62068 366 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 CYP2A13Q16696 494 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 PLEKHG4Q58EX7 1191 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 RPS27LQ71UM5 84 aaKnown RBP17.54■□□□□ 0.4
SNED1-204ENST00000401884 TMEM135Q86UB9 458 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 PIM3Q86V86 326 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 TMEM245Q9H330 911 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 MUC13Q9H3R2 512 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 NUDT4Q9NZJ9 180 aa17.54■□□□□ 0.4
SNED1-204ENST00000401884 LOC100506127A0A0U1RQW1 187 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 H3BNX3 289 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 OAS1P00973 400 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 UMPSP11172 480 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 MTHFRP42898 656 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 KIR3DL1P43629 444 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 CASP12Q6UXS9 341 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 TP53INP2Q8IXH6 220 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 NELL1Q92832 810 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ADI1Q9BV57 179 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 BRD9Q9H8M2 597 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ZBTB26Q9HCK0 441 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 SQORQ9Y6N5 450 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 DNAJA2O60884 412 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 NIPSNAP2O75323 286 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ACVRL1P37023 503 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 KRR1Q13601 381 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 OR8H2Q8N162 312 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 PROX1Q92786 737 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 CFAP97Q9P2B7 532 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 MAPRE3Q9UPY8 281 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ELOVL7A1L3X0 281 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 TMEM214Q6NUQ4 689 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 PRSS55Q6UWB4 352 aaPredicted RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 SERPINA9Q86WD7 417 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 RASAL3Q86YV0 1011 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 GALNT15Q8N3T1 639 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ZNF614Q8N883 585 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 CYP2S1Q96SQ9 504 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 CDV3Q9UKY7 258 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 FCF1Q9Y324 198 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 SGTAO43765 313 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNED1-204ENST00000401884 TRAF3Q13114 568 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 NOGQ13253 232 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 CLP1Q92989 425 aaKnown RBP17.53■□□□□ 0.4
SNED1-204ENST00000401884 SLC47A1Q96FL8 570 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ZNF778Q96MU6 729 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 ATG10Q9H0Y0 220 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 KCTD3Q9Y597 815 aa17.53■□□□□ 0.4
SNED1-204ENST00000401884 TAF1AQ15573 450 aaPredicted RBP17.52■□□□□ 0.4
SNED1-204ENST00000401884 TYW3Q6IPR3 259 aaKnown RBP17.52■□□□□ 0.4
SNED1-204ENST00000401884 RTP4Q96DX8 246 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 ERLEC1Q96DZ1 483 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 MOCOSQ96EN8 888 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNED1-204ENST00000401884 QSOX1O00391 747 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 DCLK1O15075 740 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 ETV4P43268 484 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 PGGT1BP53609 377 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 GTF2H2Q13888 395 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 PHKG1Q16816 387 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 GTF2H2CQ6P1K8 395 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 TRIM48Q8IWZ4 208 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 CCDC106Q9BWC9 280 aa17.52■□□□□ 0.4
SNED1-204ENST00000401884 NUSAP1Q9BXS6 441 aaKnown RBP17.52■□□□□ 0.4
SNED1-204ENST00000401884 SIPA1L3O60292 1781 aaPredicted RBP17.52■□□□□ 0.4
SNED1-204ENST00000401884 ZC3H7AQ8IWR0 971 aaKnown RBP17.52■□□□□ 0.39
SNED1-204ENST00000401884 ZBTB2Q8N680 514 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 ASZ1Q8WWH4 475 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 CHID1Q9BWS9 393 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 ADAMTS10Q9H324 1103 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 GKN1Q9NS71 199 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 KLHL28Q9NXS3 571 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 GALPQ9UBC7 116 aa17.52■□□□□ 0.39
SNED1-204ENST00000401884 IQCF5A8MTL0 148 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 XYLBO75191 536 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 FESP07332 822 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 PABPC1P11940 636 aaKnown RBP17.51■□□□□ 0.39
SNED1-204ENST00000401884 CYP4B1P13584 511 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 SPAM1P38567 509 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 FBXO22Q8NEZ5 403 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 OR10A6Q8NH74 314 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 TNKS2Q9H2K2 1166 aa17.51■□□□□ 0.39
SNED1-204ENST00000401884 DPP7Q9UHL4 492 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms