RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CRHR2Q13324 411 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 ABRAXAS1Q6UWZ7 409 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZYG11AQ6WRX3 759 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZNF572Q7Z3I7 529 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 RALGPS2Q86X27 583 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■■■■□ 21.9
TNFAIP3-206ENST00000612899 CRYBG2Q8N1P7 616 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 SMG7Q92540 1137 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 MSRAQ9UJ68 235 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 PSMD13Q9UNM6 376 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZNF232Q9UNY5 417 aa12.45□□□□□ -0.42
TNFAIP3-206ENST00000612899 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 PIPSLA2A3N6 862 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 H3BM21 787 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 ADH1CP00326 375 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 SPAM1P38567 509 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CLCQ05315 142 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 NAE1Q13564 534 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 UNC5BQ8IZJ1 945 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 MPP5Q8N3R9 675 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 NAT8LQ8N9F0 302 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 C19orf18Q8NEA5 215 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TLE6Q9H808 572 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 LGR5O75473 907 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 EOMESO95936 686 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 HTR1BP28222 390 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 MAPKAPK2P49137 400 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 RPIAP49247 311 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 NDST2P52849 883 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CYP4F2P78329 520 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 GNA13Q14344 377 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 LSM12Q3MHD2 195 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CEP78Q5JTW2 689 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 EIF3MQ7L2H7 374 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TMPRSS11BQ86T26 416 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CPNE9Q8IYJ1 553 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 SCAIQ8N9R8 606 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 ZFP28Q8NHY6 868 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 ITCHQ96J02 903 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 GMLQ99445 158 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CIB1Q99828 191 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 ATP6V1HQ9UI12 483 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3DA0A087WVF3 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3IA0A087WXS9 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3EA0A087X179 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3KA0A087X1G2 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3FA6NER0 549 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3LB9A6J9 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CA12O43570 354 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 IFNA16P05015 189 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3HP0C7X1 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 RPL5P46777 297 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 IL10RBQ08334 325 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 LACTB2Q53H82 288 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 SPANXN2Q5MJ10 180 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 IL23RQ5VWK5 629 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 RSBN1Q5VWQ0 802 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3GQ6DHY5 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3CQ6IPX1 549 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 HFE2Q6ZVN8 426 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D3Q8IZP1 549 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 MRPL48Q96GC5 212 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 HOPXQ9BPY8 73 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 OSBPL6Q9BZF3 934 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 LRTM1Q9HBL6 345 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 TBC1D14Q9P2M4 693 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CD84Q9UIB8 345 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
TNFAIP3-206ENST00000612899 UBXN8O00124 270 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SNAP91O60641 907 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 MT-ND1P03886 318 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 INHAP05111 366 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TSPAN19P0C672 248 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 RPL3P39023 403 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 GPAT3Q53EU6 434 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ARMC8Q8IUR7 673 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 LPGAT1Q92604 370 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 DEPDC7Q96QD5 511 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 FAM83DQ9H4H8 585 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SSU72Q9NP77 194 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 POLE3Q9NRF9 147 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 AASDHPPTQ9NRN7 309 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ANGPT4Q9Y264 503 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 NEMP2A6NFY4 417 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ALOX12P18054 663 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 ACLYP53396 1101 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 C21orf59P57076 290 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 CDC42P60953 191 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 SEMG2Q02383 582 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 CACNG1Q06432 222 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 LCP2Q13094 533 aa12.43□□□□□ -0.42
TNFAIP3-206ENST00000612899 TRAF3Q13114 568 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms