RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 IL17BQ9UHF5 180 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 EFR3BQ9Y2G0 817 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 AHCTF1Q8WYP5 2266 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 hCG_1818297A0A087WSY0 165 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 IGHV1OR21-1A0A087WYE8 117 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 PPM1DO15297 605 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 SUV39H1O43463 412 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 THRAP10827 490 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 CA4P22748 312 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 POLD2P49005 469 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 ATP1A2P50993 1020 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 MAXP61244 160 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 BIRC2Q13490 618 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 CCDC181Q5TID7 509 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 ADAMTSL4Q6UY14 1074 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 TSPAN33Q86UF1 283 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 NT5DC3Q86UY8 548 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 NLRP8Q86W28 1048 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 NDUFAF2Q8N183 169 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 AGBL5Q8NDL9 886 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 PATE1Q8WXA2 126 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 NKD1Q969G9 470 aa17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 GEMIN8Q9NWZ8 242 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-203ENST00000594298 GOLGA6CA6NDK9 693 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 GOLGA6BA6NDN3 693 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 FZD6O60353 706 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 JCHAINP01591 159 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 GOLGA6DP0CG33 693 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 CSF2RBP32927 897 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 ACTR1BP42025 376 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 GPR1P46091 355 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 FASLGP48023 281 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 MARCKSL1P49006 195 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 ACTR1AP61163 376 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 CYP4F2P78329 520 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 GPLD1P80108 840 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 IFI35P80217 286 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 NPNTQ6UXI9 565 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 ZNF765Q7L2R6 523 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 OLFM3Q96PB7 478 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 OR2M4Q96R27 311 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 SLC12A9Q9BXP2 914 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 GOLGA6AQ9NYA3 693 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 PDP2Q9P2J9 529 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 TRIM10Q9UDY6 481 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 GUCA1BQ9UMX6 200 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
SHKBP1-203ENST00000594298 B4E171 279 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 MTSS1O43312 755 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 PPFIA2O75334 1257 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 PYGLP06737 847 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 ZNF30P17039 623 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 PTPN7P35236 360 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 TSPAN7P41732 249 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 LRP8Q14114 963 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 CLCA4Q14CN2 919 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 PTPRRQ15256 657 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 PYCR3Q53H96 274 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 NKAIN2Q5VXU1 208 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 LRRC66Q68CR7 880 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 ALG1LQ6GMV1 187 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 TMEM71Q6P5X7 295 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 ZNF662Q6ZS27 426 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 BBS12Q6ZW61 710 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 RAVER1Q8IY67 606 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 TFB1MQ8WVM0 346 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 PMEPA1Q969W9 287 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 FERMT1Q9BQL6 677 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 SLC25A18Q9H1K4 315 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 ABCG8Q9H221 673 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 ADNPQ9H2P0 1102 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 KCNK4Q9NYG8 393 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 UNC13CQ8NB66 2214 aa17.41■□□□□ 0.38
SHKBP1-203ENST00000594298 MYO18BQ8IUG5 2567 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 HACD1B0YJ81 288 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 KCNK1O00180 336 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 TJP3O95049 919 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 APOC2P02655 101 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 PTMAP06454 111 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 PDHA1P08559 390 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 CTPS1P17812 591 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 CSTF2P33240 577 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 UGT1A3P35503 534 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 NFKB2Q00653 900 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 PTSQ03393 145 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 LLGL1Q15334 1064 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 DOK6Q6PKX4 331 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 RFLNAQ6ZTI6 216 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 JPH3Q8WXH2 748 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 ART4Q93070 314 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 COX14Q96I36 57 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 HEMGNQ9BXL5 484 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 ASPSCR1Q9BZE9 553 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 OSBPL8Q9BZF1 889 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 TRIM4Q9C037 500 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 PLEKHM1Q9Y4G2 1056 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 B3GALT1Q9Y5Z6 326 aa17.4■□□□□ 0.38
SHKBP1-203ENST00000594298 PIEZO2Q9H5I5 2752 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms