RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LAMA2P24043 3122 aaKnown RBP18.22■□□□□ 0.51
SDC2-202ENST00000518385 C2orf78A6NCI8 922 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SDHDO14521 159 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CCL16O15467 120 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CFLARO15519 480 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 RNASEH2AO75792 299 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 AHSGP02765 367 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 ATXN1LP0C7T5 689 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 EPCAMP16422 314 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 ARNTP27540 789 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 MAGEA8P43361 318 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CDKL1Q00532 357 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 PEX6Q13608 980 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SEPT6Q14141 434 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SIRPB2Q5JXA9 342 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 NXNQ6DKJ4 435 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SLC22A9Q8IVM8 553 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 FAM217AQ8IXS0 508 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 LSMEM2Q8N112 164 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 HJURPQ8NCD3 748 aaPredicted RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 CNDP2Q96KP4 475 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 KLHL32Q96NJ5 620 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CINPQ9BW66 212 aaPredicted RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 MEAF6Q9HAF1 191 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CD320Q9NPF0 282 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 DPP7Q9UHL4 492 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CDH7Q9ULB5 785 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SLC39A10Q9ULF5 831 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 RUVBL2Q9Y230 463 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 PCDHGA7Q9Y5G6 932 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 MIA3Q5JRA6 1907 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 MYO7AQ13402 2215 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 A0A0D9SEW6 157 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 TRIM64A6NGJ6 449 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 AQP12BA6NM10 295 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 PER2O15055 1255 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 NDST3O95803 873 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CHRNGP07510 517 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 HNRNPA1P09651 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
SDC2-202ENST00000518385 STMN1P16949 149 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 GABRR2P28476 465 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CHRNA4P43681 627 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 CD151P48509 253 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 NAGLUP54802 743 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 EMP3P54852 163 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 IRF9Q00978 393 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 POU4F1Q01851 419 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 ACVR1Q04771 509 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 PDAP1Q13442 181 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 LRP8Q14114 963 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 GRM3Q14832 879 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 LPCAT2Q7L5N7 544 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 ZNF554Q86TJ5 538 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 AQP12AQ8IXF9 295 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 PCYOX1LQ8NBM8 494 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 OR7D4Q8NG98 312 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 FNDC8Q8TC99 324 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 BRSK1Q8TDC3 778 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 MRPS31Q92665 395 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 CYP2S1Q96SQ9 504 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 SPON2Q9BUD6 331 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 ATXN3LQ9H3M9 355 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 MFSD1Q9H3U5 465 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 LSM7Q9UK45 103 aaKnown RBP18.21■□□□□ 0.51
SDC2-202ENST00000518385 FBXO5Q9UKT4 447 aa18.21■□□□□ 0.51
SDC2-202ENST00000518385 GFRA2O00451 464 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 NEMP1O14524 444 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 SRP72O76094 671 aaKnown RBP18.2■□□□□ 0.5
SDC2-202ENST00000518385 SNRPB2P08579 225 aaKnown RBP18.2■□□□□ 0.5
SDC2-202ENST00000518385 SBK3P0C264 359 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 SLC35E2BP0CK96 405 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 FCGR1AP12314 374 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 HOXB8P17481 243 aaPredicted RBP18.2■□□□□ 0.5
SDC2-202ENST00000518385 HDCP19113 662 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 LEPRP48357 1165 aaKnown RBP18.2■□□□□ 0.5
SDC2-202ENST00000518385 PKNOX1P55347 436 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 BNIP2Q12982 314 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 ZBED5Q49AG3 693 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 INO80DQ53TQ3 878 aaPredicted RBP18.2■□□□□ 0.5
SDC2-202ENST00000518385 Q6ZNB5 142 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 ADGRD2Q7Z7M1 963 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 TDHQ8IZJ6 230 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 FSTL5Q8N475 847 aaPredicted RBP18.2■□□□□ 0.5
SDC2-202ENST00000518385 EFCAB3Q8N7B9 438 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.2■□□□□ 0.53e-7■■■■■ 29.4
SDC2-202ENST00000518385 ASB2Q96Q27 587 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 TCF12Q99081 682 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 CORO1BQ9BR76 489 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 ASAH2Q9NR71 780 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 ADA2Q9NZK5 511 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 CD300AQ9UGN4 299 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 CROTQ9UKG9 612 aa18.2■□□□□ 0.5
SDC2-202ENST00000518385 SH3PXD2BA1X283 911 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 DLX3O60479 287 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 CBFA2T3O75081 653 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 RFPL2O75678 378 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 FGF19O95750 216 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 RBP1P09455 135 aa18.19■□□□□ 0.5
SDC2-202ENST00000518385 PTPN2P17706 415 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms