RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PTPN2P17706 415 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 BDNFP23560 247 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 HTR1BP28222 390 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 CHRNA4P43681 627 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 MAPK10P53779 464 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 LCP2Q13094 533 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 ACOX1Q15067 660 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 FAM98BQ52LJ0 330 aaKnown RBP17.64■□□□□ 0.42
NUP54-205ENST00000507257 XKR7Q5GH72 579 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 KIAA0319Q5VV43 1072 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 IQSEC1Q6DN90 963 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 TMEM214Q6NUQ4 689 aaKnown RBP17.64■□□□□ 0.42
NUP54-205ENST00000507257 ARHGAP36Q6ZRI8 547 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 HID1Q8IV36 788 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 OR13J1Q8NGT2 312 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 PPTC7Q8NI37 304 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 DCPSQ96C86 337 aaKnown RBP17.64■□□□□ 0.42
NUP54-205ENST00000507257 CTRCQ99895 268 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 MED10Q9BTT4 135 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 SPATA7Q9P0W8 599 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 TSC22D4Q9Y3Q8 395 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 PCDHGA8Q9Y5G5 932 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 SNX10Q9Y5X0 201 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 RBM47A0AV96 593 aaKnown RBP17.64■□□□□ 0.41
NUP54-205ENST00000507257 FAM234BA2RU67 622 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 CCDC154A6NI56 674 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 PMPCBO75439 489 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 MTHFD2P13995 350 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 PCMT1P22061 227 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 SERPINH1P50454 418 aaKnown RBP17.64■□□□□ 0.41
NUP54-205ENST00000507257 RAD23AP54725 363 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 FOXA1P55317 472 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 PHKG1Q16816 387 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 EML3Q32P44 896 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 ZNF362Q5T0B9 420 aaPredicted RBP17.64■□□□□ 0.41
NUP54-205ENST00000507257 OTUD3Q5T2D3 398 aaPredicted RBP17.64■□□□□ 0.41
NUP54-205ENST00000507257 AFMIDQ63HM1 303 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 GLYATQ6IB77 296 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 BEND5Q7L4P6 421 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 CATSPER4Q7RTX7 472 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 IFNEQ86WN2 208 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 SCML4Q8N228 414 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 SVOPLQ8N434 492 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 MFSD4AQ8N468 514 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 PDZD8Q8NEN9 1154 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 FATE1Q969F0 183 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 CCDC115Q96NT0 180 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 SEPHS2Q99611 448 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 SLC25A51Q9H1U9 297 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 ADNPQ9H2P0 1102 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 NXF3Q9H4D5 531 aaKnown RBP17.64■□□□□ 0.41
NUP54-205ENST00000507257 GIMAP2Q9UG22 337 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 WARS2Q9UGM6 360 aaKnown RBP17.64■□□□□ 0.41
NUP54-205ENST00000507257 SLC27A5Q9Y2P5 690 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 SNX5Q9Y5X3 404 aa17.64■□□□□ 0.41
NUP54-205ENST00000507257 MROH6A6NGR9 719 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 C1RP00736 705 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 CCDC159P0C7I6 412 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 SERPINB10P48595 397 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 GMPSP49915 693 aaPredicted RBP17.63■□□□□ 0.41
NUP54-205ENST00000507257 APLP1P51693 650 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 WNT3AP56704 352 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 IL18R1Q13478 541 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 NDUFA5Q16718 116 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 GEN1Q17RS7 908 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 MARCH8Q5T0T0 291 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 MANEALQ5VSG8 457 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 PLEKHG7Q6ZR37 379 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 ZDHHC13Q8IUH4 622 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 CLEC4FQ8N1N0 589 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 ZNF555Q8NEP9 628 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 PHF10Q8WUB8 498 aaKnown RBP17.63■□□□□ 0.41
NUP54-205ENST00000507257 TRIB2Q92519 343 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 PEX13Q92968 403 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 SDCCAG3Q96C92 435 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 ATOH8Q96SQ7 321 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 SMOQ99835 787 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 C16orf70Q9BSU1 422 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 OSBPL10Q9BXB5 764 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 C1QTNF3Q9BXJ4 246 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 TOR3AQ9H497 397 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 ATP13A3Q9H7F0 1226 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 CATSPERBQ9H7T0 1116 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 PDGFCQ9NRA1 345 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 RBM22Q9NW64 420 aaKnown RBP eCLIP17.63■□□□□ 0.41
NUP54-205ENST00000507257 FNIP2Q9P278 1114 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 PTGDR2Q9Y5Y4 395 aa17.63■□□□□ 0.41
NUP54-205ENST00000507257 ASB14A6NK59 587 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 SLC22A3O75751 556 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 OXSR1O95747 527 aaPredicted RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 IGLV3-25P01717 112 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ANXA6P08133 673 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 ACVR2AP27037 513 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 GRK3P35626 688 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 POLR2JP52435 117 aaKnown RBP17.62■□□□□ 0.41
NUP54-205ENST00000507257 DIO3P55073 304 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 PPP2R2BQ00005 443 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 CD300CQ08708 224 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 CDC20Q12834 499 aa17.62■□□□□ 0.41
NUP54-205ENST00000507257 EIF4EBP2Q13542 120 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms