RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 GAS6Q14393 721 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 ACOX1Q15067 660 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 DBN1Q16643 649 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 ZNF284Q2VY69 593 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 POM121L1PQ3SYA9 428 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 ATP13A5Q4VNC0 1218 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 TMEM259Q4ZIN3 620 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 LRRC73Q5JTD7 316 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 ZNF549Q6P9A3 640 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 FAM151BQ6UXP7 276 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 RFLNAQ6ZTI6 216 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 TAS2R42Q7RTR8 314 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 CLEC14AQ86T13 490 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 SIX5Q8N196 739 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 CAMKK1Q8N5S9 505 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 DDHD1Q8NEL9 900 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 CXorf40AQ8TE69 158 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 KCNJ9Q92806 393 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 LENG8Q96PV6 779 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-208ENST00000469529 PRRX2Q99811 253 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 AARSD1Q9BTE6 412 aaKnown RBP12.65□□□□□ -0.38
TRAF4-208ENST00000469529 RIOK2Q9BVS4 552 aaKnown RBP12.65□□□□□ -0.38
TRAF4-208ENST00000469529 SGK2Q9HBY8 427 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 FBXO6Q9NRD1 293 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-208ENST00000469529 SNX15Q9NRS6 342 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 TMPRSS11EQ9UL52 423 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 ANKRD6Q9Y2G4 727 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 CKAP5Q14008 2032 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 KMT2EQ8IZD2 1858 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 ZDBF2Q9HCK1 2354 aa12.65□□□□□ -0.38
TRAF4-208ENST00000469529 FAM47DPA6NHR8 397 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 QSOX1O00391 747 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 LZTS3O60299 673 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-208ENST00000469529 MMP20O60882 483 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TM7SF2O76062 418 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 C2P06681 752 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 PYGBP11216 843 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 ACADMP11310 421 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 CREB1P16220 341 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 STMN1P16949 149 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 FDXRP22570 491 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 OXTRP30559 389 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 HOXA6P31267 233 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TRIM23P36406 574 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TPMTP51580 245 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 ADPRHP54922 357 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TAS2R39P59534 338 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TIAL1Q01085 375 aaKnown RBP eCLIP12.64□□□□□ -0.397e-6■■□□□ 11.9
TRAF4-208ENST00000469529 SEMG2Q02383 582 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 BMPR2Q13873 1038 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 PDE1CQ14123 709 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-208ENST00000469529 MPP2Q14168 576 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 USP10Q14694 798 aaKnown RBP12.64□□□□□ -0.39
TRAF4-208ENST00000469529 LDLRAP1Q5SW96 308 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 HECTD2Q5U5R9 776 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 LDB1Q86U70 411 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TRIM69Q86WT6 500 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 HORMAD1Q86X24 394 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 SCAMP4Q969E2 229 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 AP2M1Q96CW1 435 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 PDLIM5Q96HC4 596 aaKnown RBP12.64□□□□□ -0.39
TRAF4-208ENST00000469529 UBXN10Q96LJ8 280 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 COPS8Q99627 209 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 SPATA16Q9BXB7 569 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 TBC1D17Q9HA65 648 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 SERGEFQ9UGK8 458 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 CRLS1Q9UJA2 301 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 CNOT6Q9ULM6 557 aaKnown RBP12.64□□□□□ -0.39
TRAF4-208ENST00000469529 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 MED16Q9Y2X0 877 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 ACOT9Q9Y305 439 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 PLLPQ9Y342 182 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 MUC6Q6W4X9 2439 aa12.64□□□□□ -0.39
TRAF4-208ENST00000469529 MIA3Q5JRA6 1907 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 A0A087X1B8 175 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 A0A096LPK6 155 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 TCRBV21S2A2A0A5A6 115 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 TMEM120BA0PK00 339 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 F8W8V4 182 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 PLK4O00444 970 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 TPP1O14773 563 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 ZNF217O75362 1048 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 ZWINTO95229 277 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 HOXC4P09017 264 aaPredicted RBP12.63□□□□□ -0.39
TRAF4-208ENST00000469529 DHRS4L1P0CG22 281 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 PRSS56P0CW18 603 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 NUDT1P36639 197 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 NHLH1Q02575 133 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
TRAF4-208ENST00000469529 Q6ZS52 159 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 ACVR1CQ8NER5 493 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 FLCNQ8NFG4 579 aa12.63□□□□□ -0.39
TRAF4-208ENST00000469529 PJA1Q8NG27 643 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms