RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IDI2Q9BXS1 227 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 ANKRD10Q9NXR5 420 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 DONSONQ9NYP3 566 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 C9orf78Q9NZ63 289 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 THEGQ9P2T0 379 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 MORF4L1Q9UBU8 362 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 FEM1BQ9UK73 627 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 SUFUQ9UMX1 484 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 BDP1A6H8Y1 2624 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 KIF16BQ96L93 1317 aa4.94□□□□□ -1.62
HMGB3P5-201ENST00000428894 PHIPQ8WWQ0 1821 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 MAGEA13PA6NCF6 341 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 C19orf81C9J6K1 198 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 CCND3P30281 292 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 SSTR2P30874 369 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 CCNA1P78396 465 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 IRX3P78415 501 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 SPP2Q13103 211 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 DOCK1Q14185 1865 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 ZRSR1Q15695 479 aaKnown RBP4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 TWISTNBQ3B726 338 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 ADCK5Q3MIX3 580 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 IL20RBQ6UXL0 311 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 GSG1LQ6UXU4 331 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 CCDC129Q6ZRS4 1044 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 G2E3Q7L622 706 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 PRSS45Q7RTY3 260 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 LURAP1LQ8IV03 231 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 MUC20Q8N307 709 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 TSPYL6Q8N831 410 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 GPATCH11Q8N954 259 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 GDPD5Q8WTR4 605 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 BADQ92934 168 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 SH3KBP1Q96B97 665 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 MTBPQ96DY7 904 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 BICD1Q96G01 975 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 LRFN5Q96NI6 719 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 IL17FQ96PD4 163 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 TCF7L2Q9NQB0 619 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 MYH2Q9UKX2 1941 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 PLXNB2O15031 1838 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 DOCK2Q92608 1830 aa4.93□□□□□ -1.62
HMGB3P5-201ENST00000428894 PIEZO1Q92508 2521 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 RLFQ13129 1914 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 MAST2Q6P0Q8 1798 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 A0A0B4J293 547 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 TYW5A2RUC4 315 aaKnown RBP4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 KBTBD13C9JR72 458 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 GAS8-AS1O95177 125 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 IGLV2-11P01706 119 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 CHRM4P08173 479 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 IGHV4-30-4P0DP06 118 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 HMGCS2P54868 508 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 OS9Q13438 667 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 TAF5Q15542 800 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 ANKRD45Q5TZF3 282 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 CES5AQ6NT32 575 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 EXOC3L1Q86VI1 746 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 SFTPA2Q8IWL1 248 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 POC1AQ8NBT0 407 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 SPATA20Q8TB22 786 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 ARRDC2Q8TBH0 407 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 SPPL3Q8TCT6 385 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 PPM1EQ8WY54 764 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 USP6NLQ92738 828 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 NOD2Q9HC29 1040 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 NDRG3Q9UGV2 375 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 GDAQ9Y2T3 454 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 LTBP2Q14767 1821 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 FRMPD3Q5JV73 1810 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 UTYO14607 1347 aa4.92□□□□□ -1.62
HMGB3P5-201ENST00000428894 XIRP2A4UGR9 3374 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 hDV102S1A0JD36 115 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 NPIPB11E5RHQ5 1161 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 EBAG9O00559 213 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 ATP2C2O75185 946 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 PLGP00747 810 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 UMODP07911 640 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 WEE2P0C1S8 567 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 HDAC4P56524 1084 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 BACE1P56817 501 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 ILF3Q12906 894 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 CALCRLQ16602 461 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 EDRF1Q3B7T1 1238 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 KRTAP24-1Q3LI83 254 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 TMEM31Q5JXX7 168 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 BEND3Q5T5X7 828 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 FAM69BQ5VUD6 431 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 DSTYKQ6XUX3 929 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 GPR142Q7Z601 462 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 NEK9Q8TD19 979 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 OR1F2PQ96R84 312 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 NODALQ96S42 347 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 MMTAG2Q9BU76 263 aaKnown RBP4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 PUS3Q9BZE2 481 aaKnown RBP4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 LMAN2LQ9H0V9 348 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 STN1Q9H668 368 aaKnown RBP4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 SALL1Q9NSC2 1324 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 FANCIQ9NVI1 1328 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms