RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SLC9A3P48764 834 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 SERPINH1P50454 418 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 PLK1P53350 603 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 EPS8Q12929 822 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 BCL7AQ4VC05 210 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 C3orf30Q96M34 536 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 TMEM74Q96NL1 305 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 NEDD4LQ96PU5 975 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 MCMBPQ9BTE3 642 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 KAT8Q9H7Z6 458 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 RANGRFQ9HD47 186 aaPredicted RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 C14orf119Q9NWQ9 140 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 AASSQ9UDR5 926 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 H3BUI4 141 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 TSPAN8P19075 237 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 FMO3P31513 532 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ST13P50502 369 aaKnown RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 NDST1P52848 882 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 CDH8P55286 799 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ISL1P61371 349 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 TGFB2P61812 414 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 TOR2AQ5JU69 321 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 IL31Q6EBC2 164 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ZNF517Q6ZMY9 492 aaPredicted RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 VN1R5Q7Z5H4 357 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ZC3HC1Q86WB0 502 aaKnown RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 C8orf48Q96LL4 319 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GPR78Q96P69 363 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 RHNO1Q9BSD3 238 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ACAT2Q9BWD1 397 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GABBR1Q9UBS5 961 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 EVLQ9UI08 416 aaPredicted RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 INVSQ9Y283 1065 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 MRPL11Q9Y3B7 192 aaKnown RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 PCDHGB6Q9Y5F9 930 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 STYXL1Q9Y6J8 313 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 MYCP01106 439 aaPredicted RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 KCNA5P22460 613 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 SLAMF1Q13291 335 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GPR50Q13585 617 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GALNT3Q14435 633 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GLYATQ6IB77 296 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 LARP4Q71RC2 724 aaKnown RBP eCLIP12.72□□□□□ -0.37
HERC3-203ENST00000407637 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GALNT7Q86SF2 657 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ZDHHC13Q8IUH4 622 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 CLYBLQ8N0X4 340 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
HERC3-203ENST00000407637 ITCHQ96J02 903 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 FEM1AQ9BSK4 669 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 PRRG3Q9BZD7 231 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 NUAK2Q9H093 628 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 ENTPD7Q9NQZ7 604 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 FAM49BQ9NUQ9 324 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 HOXC10Q9NYD6 342 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 EHD3Q9NZN3 535 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 PCDHGB1Q9Y5G3 927 aa12.72□□□□□ -0.37
HERC3-203ENST00000407637 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
HERC3-203ENST00000407637 MYL3P08590 195 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 CD36P16671 472 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 IL32P24001 234 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 MTHFRP42898 656 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.37
HERC3-203ENST00000407637 ATP4BP51164 291 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 EIF2B5Q13144 721 aaKnown RBP12.71□□□□□ -0.37
HERC3-203ENST00000407637 TRIP4Q15650 581 aaPredicted RBP12.71□□□□□ -0.37
HERC3-203ENST00000407637 SYT6Q5T7P8 510 aaPredicted RBP12.71□□□□□ -0.37
HERC3-203ENST00000407637 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 UBE2Q1Q7Z7E8 422 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 TMEM135Q86UB9 458 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 PTRH1Q86Y79 214 aaKnown RBP12.71□□□□□ -0.37
HERC3-203ENST00000407637 WDR49Q8IV35 697 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 CERS5Q8N5B7 392 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 TM9SF3Q9HD45 589 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 FBXO28Q9NVF7 368 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 STAP1Q9ULZ2 295 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 ACOT9Q9Y305 439 aa12.71□□□□□ -0.37
HERC3-203ENST00000407637 G3V2T6 193 aa12.71□□□□□ -0.38
HERC3-203ENST00000407637 PRMT5O14744 637 aaPredicted RBP12.71□□□□□ -0.38
HERC3-203ENST00000407637 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.38
HERC3-203ENST00000407637 ANGPTL1O95841 491 aa12.71□□□□□ -0.38
HERC3-203ENST00000407637 HPRP00739 348 aa12.71□□□□□ -0.38
HERC3-203ENST00000407637 IL7P13232 177 aa12.71□□□□□ -0.38
HERC3-203ENST00000407637 ATF4P18848 351 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms