RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ENTPD4Q9Y227 616 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 MYH7BA7E2Y1 1941 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 WNT9AO14904 365 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 KDELR3O43731 214 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 INPP1P49441 399 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 STK19P49842 368 aaPredicted RBP13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 TRAF2Q12933 501 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 QPCTQ16769 361 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 TBCELQ5QJ74 424 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 TDRPQ86YL5 185 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 CLDN19Q8N6F1 224 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 TOP1MTQ969P6 601 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 CASD1Q96PB1 797 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 NKX2-4Q9H2Z4 354 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 DPEP2Q9H4A9 486 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 IPPKQ9H8X2 491 aa13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 POLMQ9NP87 494 aaPredicted RBP13.03□□□□□ -0.32
PTPRN2-202ENST00000389416 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 MAST2Q6P0Q8 1798 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 NEMP2A6NFY4 417 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 FANCGO15287 622 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 ERAL1O75616 437 aaKnown RBP13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 OGNP20774 298 aaKnown RBP13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 POU1F1P28069 291 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 VHLP40337 213 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 CACNA2D1P54289 1103 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 C22orf39Q6P5X5 142 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 DHFR2Q86XF0 187 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 HID1Q8IV36 788 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 OSCP1Q8WVF1 389 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 KXD1Q9BQD3 176 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 TRIM4Q9C037 500 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 CDH19Q9H159 772 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 PSME2Q9UL46 239 aa13.02□□□□□ -0.32
PTPRN2-202ENST00000389416 A0A088AWK7 358 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 FFAR2O15552 330 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 TM7SF2O76062 418 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 SNRPB2P08579 225 aaKnown RBP13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 VIPR2P41587 438 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 ALDH6A1Q02252 535 aaKnown RBP13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 PRKCQQ04759 706 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.338e-7■■■■□ 23.2
PTPRN2-202ENST00000389416 SNAP47Q5SQN1 464 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 CLEC6AQ6EIG7 209 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 P3H2Q8IVL5 708 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 SLC39A11Q8N1S5 342 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 C10orf53Q8N6V4 93 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 TSSK3Q96PN8 268 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 RIOK2Q9BVS4 552 aaKnown RBP13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 IL36AQ9UHA7 158 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 INVSQ9Y283 1065 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 CHRNA6Q15825 494 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 PAQR3Q6TCH7 311 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 TMEM132CQ8N3T6 1108 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 AARSD1Q9BTE6 412 aaKnown RBP13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
PTPRN2-202ENST00000389416 VIPP01282 170 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 HNRNPH1P31943 449 aaKnown RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 DGKEP52429 567 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 C21orf59P57076 290 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 CLHC1Q8NHS4 586 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 NOL11Q9H8H0 719 aaKnown RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 DNAJC11Q9NVH1 559 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 TMCC3Q9ULS5 477 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ZW10O43264 779 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 DLDP09622 509 aaKnown RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SKP1P63208 163 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SAMD4BQ5PRF9 694 aaKnown RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 VWA5B1Q5TIE3 1220 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SNX20Q7Z614 316 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 OR9Q1Q8NGQ5 310 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 APOLD1Q96LR9 279 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ZDHHC4Q9NPG8 344 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 GUCY1B2O75343 617 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 IFNA14P01570 189 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 COX4I1P13073 169 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 EPCAMP16422 314 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 CCT8P50990 548 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 SPIDRQ14159 915 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ACAP2Q15057 778 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 OTUD3Q5T2D3 398 aaPredicted RBP13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 ATAD3BQ5T9A4 648 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 PARGQ86W56 976 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 TPD52L3Q96J77 140 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 RNF145Q96MT1 663 aa13.01□□□□□ -0.33
PTPRN2-202ENST00000389416 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms