RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 RASGRP3Q8IV61 690 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 OR4K2Q8NGD2 314 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 SMPDL3BQ92485 455 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 ZNF184Q99676 751 aaPredicted RBP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 DPEP3Q9H4B8 488 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 MCCC2Q9HCC0 563 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.04□□□□□ -0.64
KNOP1-201ENST00000219837 HCN3Q9P1Z3 774 aa11.04□□□□□ -0.64
KNOP1-201ENST00000219837 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ENPP3O14638 875 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SIN3BO75182 1162 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 UGT2B11O75310 529 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ARF4P18085 180 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 AQP1P29972 269 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 RPL7AP62424 266 aaKnown RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 NOMO3P69849 1222 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ECM1Q16610 540 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 MINDY4Q4G0A6 757 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 FAM131AQ6UXB0 335 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 KCTD8Q6ZWB6 473 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SNX20Q7Z614 316 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 UNC5BQ8IZJ1 945 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 POLMQ9NP87 494 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SLC38A8A6NNN8 435 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ANPEPP15144 967 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 TSHRP16473 764 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 MLLT3P42568 568 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 POLR2JP52435 117 aaKnown RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 HSPB3Q12988 150 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 B3GNT6Q6ZMB0 384 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SIDT2Q8NBJ9 832 aaKnown RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 HCAR2Q8TDS4 363 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 TAPBPLQ9BX59 468 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 IL36AQ9UHA7 158 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 A0A0J9YYE9 177 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 LRRC72A6NJI9 287 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SEC24AO95486 1093 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 TUSC3Q13454 348 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 INTS6LQ5JSJ4 861 aaKnown RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 LRRC38Q5VT99 294 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SEC14L3Q9UDX4 400 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ERVW-1Q9UQF0 538 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 VWA7Q9Y334 891 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ZNF541Q9H0D2 1346 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 CLDN4O14493 209 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 FABP3P05413 133 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SERPINA6P08185 405 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ADARP55265 1226 aaKnown RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 CDH4P55283 916 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 VBP1P61758 197 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ELF3P78545 371 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 IL18Q14116 193 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 PDK3Q15120 406 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 GFOD2Q3B7J2 385 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ATP13A5Q4VNC0 1218 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 MED27Q6P2C8 311 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 CHST15Q7LFX5 561 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SLC34A3Q8N130 599 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 KBTBD8Q8NFY9 601 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 HERVK_113Q902F9 699 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 BAP1Q92560 729 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 GBA3Q9H227 469 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SRMSQ9H3Y6 488 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 LRTM1Q9HBL6 345 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 GLOD4Q9HC38 313 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 C3orf18Q9UK00 162 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ATP6AP2A0A1C7CYW4 349 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 AP5Z1O43299 807 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 MFSD11O43934 449 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ATP6AP2O75787 350 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SCGNO76038 276 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 PPIBP23284 216 aaKnown RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 PLGLB1Q02325 96 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SLC13A2Q13183 592 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 AMZ1Q400G9 498 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 MTX3Q5HYI7 312 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 ADGRG6Q86SQ4 1221 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 FBXW8Q8N3Y1 598 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 JOSD2Q8TAC2 188 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 PLD4Q96BZ4 506 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 P2RY11Q96G91 374 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 CCDC177Q9NQR7 707 aaPredicted RBP11.03□□□□□ -0.64
KNOP1-201ENST00000219837 SNX10Q9Y5X0 201 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 HEBP2Q9Y5Z4 205 aa11.03□□□□□ -0.64
KNOP1-201ENST00000219837 CASKO14936 926 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 TPD52L2O43399 206 aaKnown RBP11.02□□□□□ -0.64
KNOP1-201ENST00000219837 B3GALT2O43825 422 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 TMCC2O75069 709 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 MC1RQ01726 317 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 UBXN11Q5T124 520 aa11.02□□□□□ -0.64
KNOP1-201ENST00000219837 SLC24A5Q71RS6 500 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms