RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 GPR21Q99679 349 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 OSBPL1AQ9BXW6 950 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 POMKQ9H5K3 350 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 ASB8Q9H765 288 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 MAGEE1Q9HCI5 957 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 ELOVL2Q9NXB9 296 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 B4GALT6Q9UBX8 382 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 DNAJC16Q9Y2G8 782 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 PRSS21Q9Y6M0 314 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 WASF2Q9Y6W5 498 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 KLHL2O95198 593 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 POP4O95707 220 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 DLDP09622 509 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 GRIN2CQ14957 1233 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 ZNF648Q5T619 568 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 ALYREFQ86V81 257 aaKnown RBP18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 SORT1Q99523 831 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 GATA5Q9BWX5 397 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 DENND2DQ9H6A0 471 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 PLA2G4CQ9UP65 541 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 FIS1Q9Y3D6 152 aa18.12■□□□□ 0.49
SNAPC3-207ENST00000610884 TCF20Q9UGU0 1960 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 CCDC189A1A4V9 331 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 NCF1BA6NI72 391 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 NCF1CA8MVU1 366 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 SLC9A3R1O14745 358 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 RHOBTB1O94844 696 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 ADH1CP00326 375 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 NCF1P14598 390 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 HNRNPLP14866 589 aaKnown RBP eCLIP18.11■□□□□ 0.497e-13■■■■■ 49.6
SNAPC3-207ENST00000610884 CHRM3P20309 590 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 PEX19P40855 299 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 RECQLP46063 649 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 AFTPHQ6ULP2 937 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 GDPD4Q6W3E5 623 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 ETFBKMTQ8IXQ9 262 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 TXNDC5Q8NBS9 432 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 ESAMQ96AP7 390 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 TMEM120AQ9BXJ8 343 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 NSUN3Q9H649 340 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 DEC1Q9P2X7 70 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 KPNA3O00505 521 aaPredicted RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 TFEBP19484 476 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 GDI1P31150 447 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 AQP5P55064 265 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 CTSL3PQ5NE16 218 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 DET1Q7L5Y6 550 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 CLNKQ7Z7G1 428 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 STK40Q8N2I9 435 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 ZNF781Q8N8C0 355 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 FUBP1Q96AE4 644 aaKnown RBP18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 CACNA2D2Q9NY47 1150 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 ARMCX1Q9P291 453 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 SLC30A1Q9Y6M5 507 aa18.11■□□□□ 0.49
SNAPC3-207ENST00000610884 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 TMEM233B4DJY2 109 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 TROVE2P10155 538 aaKnown RBP eCLIP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 PTPN4P29074 926 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 CLCN5P51795 746 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 FNDC3BQ53EP0 1204 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 MARK1Q9P0L2 795 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 FAM8A1Q9UBU6 413 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 FBXO10Q9UK96 956 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 HCN2Q9UL51 889 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 CDH7Q9ULB5 785 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 CAPN8A6NHC0 703 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 SNNO75324 88 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 SERPINB3P29508 390 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 LTBRP36941 435 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 PDAP1Q13442 181 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 ADGRE1Q14246 886 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 INSCQ1MX18 579 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 CCDC153Q494R4 210 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 ATAT1Q5SQI0 421 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 SERPINA9Q86WD7 417 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 PCDH20Q8N6Y1 951 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 LKAAEAR1Q8TD35 194 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 SCRN2Q96FV2 425 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 TSNARE1Q96NA8 513 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 MIPEPQ99797 713 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 WRAP53Q9BUR4 548 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 TRIM55Q9BYV6 548 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 UTP6Q9NYH9 597 aaKnown RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 HEY2Q9UBP5 337 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 CORO1CQ9ULV4 474 aaPredicted RBP18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 COQ6Q9Y2Z9 468 aa18.1■□□□□ 0.49
SNAPC3-207ENST00000610884 TARM1B6A8C7 271 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 PPP6CO00743 305 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 LIN7AO14910 233 aaPredicted RBP18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 CRABP2P29373 138 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 GJA4P35212 333 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 NNMTP40261 264 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 PTDSS1P48651 473 aaKnown RBP18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 SEC13P55735 322 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 SESN3P58005 492 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 OR4D1Q15615 310 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 Q6ZVL8 140 aa18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 KIAA0907Q7Z7F0 614 aaPredicted RBP18.09■□□□□ 0.49
SNAPC3-207ENST00000610884 GPR150Q8NGU9 434 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms