RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SPOCD1Q6ZMY3 1216 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 ZNF574Q6ZN55 896 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 HSD11B1LQ7Z5J1 315 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 VASH2Q86V25 355 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 CCDC50Q8IVM0 306 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 LRRC8AQ8IWT6 810 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 CCDC13Q8IYE1 715 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 RNF10Q8N5U6 811 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 TEX26Q8N6G2 289 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 PLD5Q8N7P1 536 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 HDAC11Q96DB2 347 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 SCRN2Q96FV2 425 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 SCARF2Q96GP6 870 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 MCCC1Q96RQ3 725 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 GOLPH3Q9H4A6 298 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 AMFRQ9UKV5 643 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 SUFUQ9UMX1 484 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 PCDHGA3Q9Y5H0 932 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 PCDHA3Q9Y5H8 950 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 SCN8AQ9UQD0 1980 aa17.47■□□□□ 0.39
SHKBP1-203ENST00000594298 IGHV5-10-1A0A0J9YXX1 117 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 MACROD2A1Z1Q3 448 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 NPIPB15A6NHN6 443 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 STMND1H3BQB6 276 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 AGRPO00253 132 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 PPP1R12AO14974 1030 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 KRT86O43790 486 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 CCL4P13236 92 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 WT1P19544 449 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 CTNNA2P26232 953 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 ALDH4A1P30038 563 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 CTNNA1P35221 906 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 ETV3P41162 512 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 CDKN2BP42772 138 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 GNPDA1P46926 289 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 CSRP3P50461 194 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 COPS2P61201 443 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 DPTQ07507 201 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 ITKQ08881 620 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 TRAF2Q12933 501 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 TAZQ16635 292 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 NAGSQ8N159 534 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 PDCD6IPQ8WUM4 868 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 MAML1Q92585 1016 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 NUDT22Q9BRQ3 303 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 POLR1EQ9GZS1 481 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 RBM22Q9NW64 420 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 PPIL1Q9Y3C6 166 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 ST14Q9Y5Y6 855 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 ADGRG1Q9Y653 693 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 ANKRD36A6QL64 1941 aa17.46■□□□□ 0.39
SHKBP1-203ENST00000594298 PGLSO95336 258 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 MAP3K6O95382 1288 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 FAM87AP0C7U9 286 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 AK4P27144 223 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 ADCY8P40145 1251 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 LIMK2P53671 638 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 RWDD2BP57060 319 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 DYNLT1P63172 113 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 CTBSQ01459 385 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 PPIDQ08752 370 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 SLC10A2Q12908 348 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 PPP2R5EQ16537 467 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 TBR1Q16650 682 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 KAZNQ674X7 775 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 DENND2CQ68D51 928 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 RAET1GQ6H3X3 334 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 SLC30A9Q6PML9 568 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 Q6ZVL8 140 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 USP45Q70EL2 814 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 PEX26Q7Z412 305 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 TECPR1Q7Z6L1 1165 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 UBL4BQ8N7F7 174 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 OR4D9Q8NGE8 314 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 PTCD2Q8WV60 388 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 CCDC74BQ96LY2 380 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 TAAR9Q96RI9 348 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 DPYSL5Q9BPU6 564 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
SHKBP1-203ENST00000594298 GRID2IPA4D2P6 1211 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 MIF4GDA9UHW6 222 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 TERTO14746 1132 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 CST8O60676 142 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 SOD1P00441 154 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 CCDC175P0C221 793 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 FGF3P11487 239 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 ARSDP51689 593 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 AP1B1Q10567 949 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 ARMC12Q5T9G4 340 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 ATG14Q6ZNE5 492 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 RCBTB1Q8NDN9 531 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 PIH1D2Q8WWB5 315 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 HTR3CQ8WXA8 447 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 KRT35Q92764 455 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 P3H4Q92791 437 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 DDA1Q9BW61 102 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 CDH19Q9H159 772 aa17.44■□□□□ 0.38
SHKBP1-203ENST00000594298 SUDS3Q9H7L9 328 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms