RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRIM62Q9BVG3 475 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 ALG9Q9H6U8 611 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 NMUR1Q9HB89 426 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 DNAJB4Q9UDY4 337 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 STK39Q9UEW8 545 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 A0A0G2JMZ2 1700 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TTC3P53804 2025 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 TRPC5OSA6NMA1 111 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 E9PAM4 449 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 J3KR12 359 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TBX18O95935 607 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CHRNA1P02708 482 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 NFKB2Q00653 900 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 DSC2Q02487 901 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 FOLH1Q04609 750 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 GRIK3Q13003 919 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TIGD7Q6NT04 549 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 CYP2R1Q6VVX0 501 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PIWIL4Q7Z3Z4 852 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 BNIPLQ7Z465 357 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CIR1Q86X95 450 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 PDSS2Q86YH6 399 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 DNAJB8Q8NHS0 232 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 CHAC2Q8WUX2 184 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 IRGQQ8WZA9 623 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PGAP3Q96FM1 320 aaPredicted RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 PSMG3-AS1Q96PY0 264 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 MRPL57Q9BQC6 102 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 RTP3Q9BQQ7 232 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TMPRSS13Q9BYE2 586 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 Q9H521 79 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 TBC1D13Q9NVG8 400 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 EPS15L1Q9UBC2 864 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 APPL1Q9UKG1 709 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 PSMD13Q9UNM6 376 aa5.36□□□□□ -1.55
VAPA-203ENST00000577539 COPG1Q9Y678 874 aaKnown RBP5.36□□□□□ -1.55
VAPA-203ENST00000577539 C9JVG2 144 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 UBDO15205 165 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 FGF10O15520 208 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 CRCPO75575 148 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CSPG5O95196 566 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SBK3P0C264 359 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PRDX6P30041 224 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CYP2C18P33260 490 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ID4P47928 161 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RXRGP48443 463 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 GPR15P49685 360 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SERPINH1P50454 418 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 STX1BP61266 288 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SLC10A7Q0GE19 358 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RALGDSQ12967 914 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CEACAM7Q14002 265 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 FASTKQ14296 549 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 RPS6KA2Q15349 733 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PSMD5Q16401 504 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 BRMS1LQ5PSV4 323 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CLEC6AQ6EIG7 209 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 MFSD6LQ8IWD5 586 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 OR52K2Q8NGK3 314 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ZNF483Q8TF39 744 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 ISL2Q96A47 359 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 DCUN1D1Q96GG9 259 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RPRD1AQ96P16 312 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 C1QTNF1Q9BXJ1 281 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SEMA6AQ9H2E6 1030 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CRIM1Q9NZV1 1036 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PRPF19Q9UMS4 504 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 EMC9Q9Y3B6 208 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ZNF451Q9Y4E5 1061 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 KCTD3Q9Y597 815 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PCDHGB3Q9Y5G1 929 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 HS3ST4Q9Y661 456 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 OTOFQ9HC10 1997 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 HEATR9A2RTY3 570 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 A6NCN8 305 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 TTC36A6NLP5 189 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 LINC01387J3KSC0 135 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 MGEA5O60502 916 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SOAT2O75908 522 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 WISP1O95388 367 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 COL6A2P12110 1019 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 KCNA5P22460 613 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RENBPP51606 427 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PRKAA2P54646 552 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PSME3P61289 254 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 MS4A2Q01362 244 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 TUSC3Q13454 348 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PTPRCAPQ14761 206 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CYTH1Q15438 398 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 FBXO48Q5FWF7 155 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 C10orf120Q5SQS8 335 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 GPR158Q5T848 1215 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 C1orf122Q6ZSJ8 110 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 BHLHA9Q7RTU4 235 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 DDIASQ8IXT1 998 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 LSMEM2Q8N112 164 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RTL3Q8N8U3 475 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms