RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 BRSK1Q8TDC3 778 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 HIC2Q96JB3 615 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 CNDP2Q96KP4 475 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 BPIFA1Q9NP55 256 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 EIF2B3Q9NR50 452 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 SPASTQ9UBP0 616 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 ZMIZ1Q9ULJ6 1067 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 NEU2Q9Y3R4 380 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 SAR1BQ9Y6B6 198 aa15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 OAS3Q9Y6K5 1087 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-219ENST00000560871 TRIM38O00635 465 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 INPP4BO15327 924 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 LDB2O43679 373 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 BUD23O43709 281 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 IVLP07476 585 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 SPAM1P38567 509 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 GRIA1P42261 906 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 ZNF140P52738 457 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 PTPRCAPQ14761 206 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 PROX2Q3B8N5 592 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 ZDHHC20Q5W0Z9 365 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 C4orf22Q6V702 233 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 GSTA5Q7RTV2 222 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 LINC00523Q86TU6 105 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 OR52K1Q8NGK4 314 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 OR13C4Q8NGS5 318 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 LMX1AQ8TE12 382 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 SCARF2Q96GP6 870 aaPredicted RBP15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 VPS35Q96QK1 796 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 C19orf43Q9BQ61 176 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 SLC13A1Q9BZW2 595 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 IL26Q9NPH9 171 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 CASS4Q9NQ75 786 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 PIH1D1Q9NWS0 290 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 NLGN3Q9NZ94 848 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 FRYQ5TBA9 3013 aa15.38■□□□□ 0.05
RABGGTA-219ENST00000560871 ARID1BQ8NFD5 2236 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 USP24Q9UPU5 2620 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 E7EVH7 732 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 LMO7DNF2Z398 122 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 FFAR2O15552 330 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 GPR39O43194 453 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 TNFP01375 233 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 APRTP07741 180 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 LPOP22079 712 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 POLD2P49005 469 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 ETF1P62495 437 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 CDH17Q12864 832 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 C1orf61Q13536 156 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 SMAD1Q15797 465 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 ATP13A5Q4VNC0 1218 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 RD3Q7Z3Z2 195 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 GALNT15Q8N3T1 639 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 FSTL5Q8N475 847 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 OR4K2Q8NGD2 314 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 CAPZA3Q96KX2 299 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 SPATA16Q9BXB7 569 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 CARS2Q9HA77 564 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 CYP4F12Q9HCS2 524 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 VPS18Q9P253 973 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 SUFUQ9UMX1 484 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 PKP3Q9Y446 797 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 KCTD3Q9Y597 815 aa15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 PCYT1BQ9Y5K3 369 aaPredicted RBP15.37■□□□□ 0.05
RABGGTA-219ENST00000560871 CEP295Q9C0D2 2601 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 LY6G6EA0A0G2JKS1 128 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 GLYATL1P3A0A0U1RQE8 302 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 NEMP2A6NFY4 417 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 C2orf81A6NN90 581 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 TPP1O14773 563 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 STX7O15400 261 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 SIGLEC6O43699 453 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 DNAJC6O75061 913 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 CRTAMO95727 393 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 KRT14P02533 472 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 ALPPL2P10696 532 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 TPSB2P20231 275 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 CA5AP35218 305 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 MAGEA6P43360 314 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 BASP1P80723 227 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 DNAJC3Q13217 504 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 ELOCQ15369 112 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 TRIP13Q15645 432 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 TPSAB1Q15661 275 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 DOK6Q6PKX4 331 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 DHRS13Q6UX07 377 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 ZNF534Q76KX8 674 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 PHYKPLQ8IUZ5 450 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 FAM181AQ8N9Y4 354 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 ZCCHC14Q8WYQ9 949 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 GLYATL1Q969I3 302 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 DUSP23Q9BVJ7 150 aa15.36■□□□□ 0.05
RABGGTA-219ENST00000560871 TMEM168Q9H0V1 697 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms