RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TJP3O95049 919 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ASMTLO95671 621 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FGF1P05230 155 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PYGMP11217 842 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NFKB1P19838 968 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RBL1P28749 1068 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ADCY8P40145 1251 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TNNT3P45378 269 aaPredicted RBP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 WNT3AP56704 352 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ILF3Q12906 894 aaKnown RBP eCLIP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NOMO1Q15155 1222 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 DARS2Q6PI48 645 aaKnown RBP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 DOK6Q6PKX4 331 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 BLOC1S3Q6QNY0 202 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 KDELC1Q6UW63 502 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RBM44Q6ZP01 1051 aaKnown RBP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LYSMD3Q7Z3D4 306 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NRROSQ86YC3 692 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LRRC8AQ8IWT6 810 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 UBL4BQ8N7F7 174 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 KYQ8NBH2 561 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCDC112Q8NEF3 446 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ACTL9Q8TC94 416 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 UBE2Q2Q8WVN8 375 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 EID2BQ96D98 161 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NXPE2Q96DL1 559 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCDC3Q9BQI4 270 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 DESI2Q9BSY9 194 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GPR63Q9BZJ6 419 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CDH19Q9H159 772 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 DPEP2Q9H4A9 486 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SUDS3Q9H7L9 328 aaPredicted RBP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SPATS2LQ9NUQ6 558 aaKnown RBP9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 UBP1Q9NZI7 540 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SHOC2Q9UQ13 582 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PKD1L2Q7Z442 2459 aa9.67□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NBEAQ8NFP9 2946 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MIF4GDA9UHW6 222 aaKnown RBP9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TMX2-CTNND1H3BSU7 103 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 INPP4BO15327 924 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NOBOXO60393 691 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 USP12O75317 370 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PIRTP0C851 137 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RBP3P10745 1247 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PNLIPP16233 465 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GLB1P16278 677 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 EIF3EP60228 445 aaKnown RBP9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CTBSQ01459 385 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 OTUD4Q01804 1114 aaKnown RBP9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MPP3Q13368 585 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ISXQ2M1V0 245 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 C14orf28Q4W4Y0 310 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PYCR3Q53H96 274 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HENMT1Q5T8I9 393 aaKnown RBP9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GALNT13Q8IUC8 556 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CDKL3Q8IVW4 592 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ALG3Q92685 438 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCDC74AQ96AQ1 378 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MRGPRX2Q96LB1 330 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HERPUD2Q9BSE4 406 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SPATA16Q9BXB7 569 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 KCNF1Q9H3M0 494 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRABDQ9H4I3 376 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 C10orf88Q9H8K7 445 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RMI1Q9H9A7 625 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TAAR2Q9P1P5 351 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LRIT1Q9P2V4 623 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRIM10Q9UDY6 481 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZNHIT2Q9UHR6 403 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 APPL1Q9UKG1 709 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZNF711Q9Y462 761 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PLEKHM1Q9Y4G2 1056 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PCDHB1Q9Y5F3 818 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PIKFYVEQ9Y2I7 2098 aa9.66□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZFHX4Q86UP3 3567 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 A0A0U1RQJ8 604 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GOLGA6L9A6NEM1 432 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 FADS2P1A8MWK0 482 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 B4DGG1 531 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NTN3O00634 580 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZW10O43264 779 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NUDT21O43809 227 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZNF189O75820 626 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ANXA9O76027 345 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 STK10O94804 968 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SLC25A14O95258 325 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 AK4P27144 223 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ACTN2P35609 894 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LSSP48449 732 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GEMP55040 296 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCL7P80098 99 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCZ1BP86790 482 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 CCZ1P86791 482 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SPIDRQ14159 915 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HLTFQ14527 1009 aaKnown RBP eCLIP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SIRPB2Q5JXA9 342 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ANKRD20A2Q5SQ80 823 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms