RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 KLQ9UEF7 1012 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 SLC17A4Q9Y2C5 497 aa19.3■□□□□ 0.68
DDX55-207ENST00000540763 TMEM202A6NGA9 273 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 GPR89AB7ZAQ6 455 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 FLRT2O43155 660 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 TTI1O43156 1089 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 PIAS2O75928 621 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 TMEM63AO94886 807 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 IVLP07476 585 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 GPR89BP0CG08 455 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 HK3P52790 923 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 SRP54P61011 504 aaKnown RBP19.29■□□□□ 0.68
DDX55-207ENST00000540763 CERCAMQ5T4B2 595 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 ENPP7Q6UWV6 458 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 KANSL1Q7Z3B3 1105 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 PHYKPLQ8IUZ5 450 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 PHACTR4Q8IZ21 702 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 SDR16C5Q8N3Y7 309 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 SAP25Q8TEE9 199 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 GLYATL1Q969I3 302 aa19.29■□□□□ 0.68
DDX55-207ENST00000540763 CNOT6Q9ULM6 557 aaKnown RBP19.29■□□□□ 0.68
DDX55-207ENST00000540763 TCRBV7S3A2A0A539 114 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 PRSS38A1L453 326 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 GAPDHSO14556 408 aaPredicted RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 BUD23O43709 281 aaKnown RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 CD59P13987 128 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 JUNDP17535 347 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 IVDP26440 423 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 ACVR1Q04771 509 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 C2orf54Q08AI8 447 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 SEPT6Q14141 434 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 SKIDA1Q1XH10 827 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 ALG11Q2TAA5 492 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 PCID2Q5JVF3 399 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 ANKRD22Q5VYY1 191 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 PPHLN1Q8NEY8 458 aaKnown RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 OR13C4Q8NGS5 318 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 SCARF2Q96GP6 870 aaPredicted RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 CNTNAP3BQ96NU0 1288 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 CNTNAP3Q9BZ76 1288 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 SLC13A1Q9BZW2 595 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 RMI1Q9H9A7 625 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 MRM3Q9HC36 420 aaKnown RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 FGF22Q9HCT0 170 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 PIH1D1Q9NWS0 290 aaKnown RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 SPASTQ9UBP0 616 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 APOBEC3BQ9UH17 382 aaKnown RBP19.28■□□□□ 0.68
DDX55-207ENST00000540763 TCAF1Q9Y4C2 921 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 KCTD3Q9Y597 815 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 CSNK1G3Q9Y6M4 447 aa19.28■□□□□ 0.68
DDX55-207ENST00000540763 AGAP14A8MT82 685 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 TM4SF5O14894 197 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 PRAMEF1O95521 474 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 CEACAM5P06731 702 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 MAGEA3P43357 314 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 XIAPP98170 497 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 MORF4L2Q15014 288 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 UAP1L1Q3KQV9 507 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 ATP13A5Q4VNC0 1218 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 TSTD2Q5T7W7 516 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 FAM151BQ6UXP7 276 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 FSTL5Q8N475 847 aaPredicted RBP19.27■□□□□ 0.68
DDX55-207ENST00000540763 MNS1Q8NEH6 495 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 OR1E3Q8WZA6 343 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 PDXPQ96GD0 296 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 SNF8Q96H20 258 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 DNAJC1Q96KC8 554 aaKnown RBP19.27■□□□□ 0.68
DDX55-207ENST00000540763 SERPINB12Q96P63 405 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 KLF15Q9UIH9 416 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 FKBPLQ9UIM3 349 aa19.27■□□□□ 0.68
DDX55-207ENST00000540763 PNMA8BQ9ULN7 279 aaPredicted RBP19.27■□□□□ 0.68
DDX55-207ENST00000540763 CNOT1A5YKK6 2376 aaKnown RBP19.26■□□□□ 0.67
DDX55-207ENST00000540763 NEMP2A6NFY4 417 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 INPP4BO15327 924 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 SRP72O76094 671 aaKnown RBP19.26■□□□□ 0.67
DDX55-207ENST00000540763 SLC25A14O95258 325 aaPredicted RBP19.26■□□□□ 0.67
DDX55-207ENST00000540763 TNFP01375 233 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 DGKAP23743 735 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 GRK6P43250 576 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 SESN2P58004 480 aaPredicted RBP19.26■□□□□ 0.67
DDX55-207ENST00000540763 PEX6Q13608 980 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 PTPRCAPQ14761 206 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 CHRNA6Q15825 494 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 GPR33Q49SQ1 333 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 LDLRAP1Q5SW96 308 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 PRAMEF14Q5SWL7 426 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 IZUMO3Q5VZ72 239 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 CAND1Q86VP6 1230 aaKnown RBP19.26■□□□□ 0.67
DDX55-207ENST00000540763 BBOF1Q8ND07 529 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 ZNF548Q8NEK5 533 aaPredicted RBP19.26■□□□□ 0.67
DDX55-207ENST00000540763 DDHD1Q8NEL9 900 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 ULK4Q96C45 1275 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 SGSM3Q96HU1 749 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 TRIM51Q9BSJ1 452 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 TRIM39Q9HCM9 518 aa19.26■□□□□ 0.67
DDX55-207ENST00000540763 EFCAB8A8MWE9 144 aa19.25■□□□□ 0.67
DDX55-207ENST00000540763 AQP9O43315 295 aa19.25■□□□□ 0.67
DDX55-207ENST00000540763 VEGFDO43915 354 aa19.25■□□□□ 0.67
DDX55-207ENST00000540763 SEC31AO94979 1220 aaKnown RBP19.25■□□□□ 0.67
DDX55-207ENST00000540763 ITGALP20701 1170 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms