RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 CPT1BQ92523 772 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 NUS1Q96E22 293 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 KLHDC7BQ96G42 594 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 KRT12Q99456 494 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 C19orf43Q9BQ61 176 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 PKD2L2Q9NZM6 624 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 NFKBIL1Q9UBC1 381 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-222ENST00000520948 MRFAP1Q9Y605 127 aa18.06■□□□□ 0.48
VEGFA-222ENST00000520948 EIF4E1BA6NMX2 242 aaKnown RBP18.05■□□□□ 0.48
VEGFA-222ENST00000520948 SDC3O75056 442 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 THEGLP0DJG4 465 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 TPH1P17752 444 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 ITPKBP27987 946 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 TEAD1P28347 426 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 VPS41P49754 854 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 YPEL5P62699 121 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 DR1Q01658 176 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 TARDBPQ13148 414 aaKnown RBP eCLIP18.05■□□□□ 0.483e-6■■■■□ 20.1
VEGFA-222ENST00000520948 INPP5AQ14642 412 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 Q6ZSR6 202 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 ZNF534Q76KX8 674 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 JAMLQ86YT9 394 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 DCP2Q8IU60 420 aaKnown RBP18.05■□□□□ 0.48
VEGFA-222ENST00000520948 SLC22A18ASQ8N1D0 253 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 SCAMP4Q969E2 229 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 APOOQ9BUR5 198 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 AK5Q9Y6K8 562 aa18.05■□□□□ 0.48
VEGFA-222ENST00000520948 K7ESM1 405 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 TTI1O43156 1089 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 LDB2O43679 373 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 TLX3O43711 291 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-222ENST00000520948 ZNF500O60304 480 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-222ENST00000520948 MAGEC1O60732 1142 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 SOD1P00441 154 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 HOXC4P09017 264 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-222ENST00000520948 BPIP17213 487 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 PSMA3P25788 255 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 RABIFP47224 123 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 LMAN1P49257 510 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 DCDC1P59894 354 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 C2orf54Q08AI8 447 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 PPP1R7Q15435 360 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 TPRG1LQ5T0D9 272 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 HENMT1Q5T8I9 393 aaKnown RBP18.04■□□□□ 0.48
VEGFA-222ENST00000520948 ANKRD22Q5VYY1 191 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 GLT6D1Q7Z4J2 308 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 NAT8LQ8N9F0 302 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 DTX3LQ8TDB6 740 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 AP2M1Q96CW1 435 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 AGAP2Q99490 1192 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 CDH19Q9H159 772 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 FAM83DQ9H4H8 585 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 RAD18Q9NS91 495 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 CD84Q9UIB8 345 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 KCTD3Q9Y597 815 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 ARL5AQ9Y689 179 aa18.04■□□□□ 0.48
VEGFA-222ENST00000520948 PPFIA2O75334 1257 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 PCCBP05166 539 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 TSHRP16473 764 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 LPOP22079 712 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-222ENST00000520948 CKAP4Q07065 602 aaKnown RBP18.03■□□□□ 0.48
VEGFA-222ENST00000520948 CERCAMQ5T4B2 595 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 RNASEH2BQ5TBB1 312 aaKnown RBP18.03■□□□□ 0.48
VEGFA-222ENST00000520948 LRRC8BQ6P9F7 803 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 KANSL1Q7Z3B3 1105 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 OXR1Q8N573 874 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 MCUQ8NE86 351 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 PLEKHG4BQ96PX9 1271 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 RANBP9Q96S59 729 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 RIOK2Q9BVS4 552 aaKnown RBP18.03■□□□□ 0.48
VEGFA-222ENST00000520948 TEX101Q9BY14 249 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 ERVMER34-1Q9H9K5 563 aa18.03■□□□□ 0.48
VEGFA-222ENST00000520948 PIH1D1Q9NWS0 290 aaKnown RBP18.03■□□□□ 0.48
VEGFA-222ENST00000520948 SPTY2D1-AS1A0A0U1RR47 76 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 MROH6A6NGR9 719 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 C2orf81A6NN90 581 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 DNALI1O14645 258 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-222ENST00000520948 BUD23O43709 281 aaKnown RBP18.02■□□□□ 0.48
VEGFA-222ENST00000520948 TMEM63AO94886 807 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 CRTAMO95727 393 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 CDK4P11802 303 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 ADCY8P40145 1251 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 RXRGP48443 463 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 NPY2RP49146 381 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 PTPRCAPQ14761 206 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 PPP1R21Q6ZMI0 780 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 DNAAF3Q8N9W5 541 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 FUBP1Q96AE4 644 aaKnown RBP18.02■□□□□ 0.48
VEGFA-222ENST00000520948 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 ZNF106Q9H2Y7 1883 aaKnown RBP18.02■□□□□ 0.48
VEGFA-222ENST00000520948 BPIFA1Q9NP55 256 aa18.02■□□□□ 0.48
VEGFA-222ENST00000520948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.02■□□□□ 0.481e-9■□□□□ 10.2
VEGFA-222ENST00000520948 CNOT6Q9ULM6 557 aaKnown RBP18.02■□□□□ 0.48
VEGFA-222ENST00000520948 ARID1BQ8NFD5 2236 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-222ENST00000520948 BPTFQ12830 3046 aa18.01■□□□□ 0.47
VEGFA-222ENST00000520948 FAM187AA6NFU0 413 aa18.01■□□□□ 0.47
VEGFA-222ENST00000520948 AP3B1O00203 1094 aa18.01■□□□□ 0.47
VEGFA-222ENST00000520948 GAPDHSO14556 408 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-222ENST00000520948 TP73O15350 636 aa18.01■□□□□ 0.47
VEGFA-222ENST00000520948 RAD51CO43502 376 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms