RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 NEU3Q9UQ49 428 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 PCDHGB1Q9Y5G3 927 aa17.68■□□□□ 0.42
NUP54-205ENST00000507257 CLDN5O00501 218 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 GABRDO14764 452 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 MAFKO60675 156 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 KATNA1O75449 491 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 NCAM1P13591 858 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 CHRM3P20309 590 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 TGM1P22735 817 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 ZFP36L2P47974 494 aaKnown RBP17.67■□□□□ 0.42
NUP54-205ENST00000507257 SPCS2Q15005 226 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 RABL3Q5HYI8 236 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 C6orf141Q5SZD1 244 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 TIGD7Q6NT04 549 aaPredicted RBP17.67■□□□□ 0.42
NUP54-205ENST00000507257 NOTUMQ6P988 496 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 SAMD7Q7Z3H4 446 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 MICALL2Q8IY33 904 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 CADM3Q8N126 398 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 ISG20Q96AZ6 181 aaKnown RBP17.67■□□□□ 0.42
NUP54-205ENST00000507257 TUBGCP3Q96CW5 907 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 ZNF419Q96HQ0 510 aaPredicted RBP17.67■□□□□ 0.42
NUP54-205ENST00000507257 CELF6Q96J87 481 aaKnown RBP17.67■□□□□ 0.42
NUP54-205ENST00000507257 NSMCE2Q96MF7 247 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 NUSAP1Q9BXS6 441 aaKnown RBP17.67■□□□□ 0.42
NUP54-205ENST00000507257 LRRC3Q9BY71 257 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 MFSD1Q9H3U5 465 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 SPON1Q9HCB6 807 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 MID1IP1Q9NPA3 183 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 USE1Q9NZ43 259 aa17.67■□□□□ 0.42
NUP54-205ENST00000507257 B4GAT1O43505 415 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 PEX10O60683 326 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 RSL1D1O76021 490 aaKnown RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 KCNH1O95259 989 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 RAP2AP10114 183 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 CD1DP15813 335 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 S100A1P23297 94 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 SUOXP51687 545 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 CTF1Q16619 201 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 PYCR3Q53H96 274 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 GPR158Q5T848 1215 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 ITIH5Q86UX2 942 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 LRRC49Q8IUZ0 686 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 KIAA2013Q8IYS2 634 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 AADATQ8N5Z0 425 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 DPP10Q8N608 796 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 PTGR2Q8N8N7 351 aaPredicted RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 SMG8Q8ND04 991 aaKnown RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 DNAJB14Q8TBM8 379 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 PTERQ96BW5 349 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 ZIM2Q9NZV7 527 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 PDE10AQ9Y233 779 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 SMIM28A0A1B0GU29 152 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 SLC22A1O15245 554 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 FGF10O15520 208 aaPredicted RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 KDM1AO60341 852 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 GABARAPO95166 117 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 HTR1AP08908 422 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 PABPC1P11940 636 aaKnown RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 NCK1P16333 377 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 TSPAN8P19075 237 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 FDXRP22570 491 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 CDC42EP1Q00587 391 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 KDELC1Q6UW63 502 aa17.66■□□□□ 0.42
NUP54-205ENST00000507257 CHDHQ8NE62 594 aaPredicted RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 DNMT3BQ9UBC3 853 aaKnown RBP17.66■□□□□ 0.42
NUP54-205ENST00000507257 MIA3Q5JRA6 1907 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 PFDN6O15212 129 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 CNMDO75829 334 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 S1PR4O95977 384 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 CYBBP04839 570 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 HNRNPFP52597 415 aaKnown RBP17.65■□□□□ 0.42
NUP54-205ENST00000507257 CDKN2DP55273 166 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 CDH13P55290 713 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 MAP3K7CLP57077 242 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 LILRA4P59901 499 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 Q3C1V9 767 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 PAGE3Q5JUK9 113 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 BHLHA9Q7RTU4 235 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 ZNF566Q969W8 418 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 TMBIM1Q969X1 311 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 EMID1Q96A84 441 aaPredicted RBP17.65■□□□□ 0.42
NUP54-205ENST00000507257 RNF145Q96MT1 663 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 HGH1Q9BTY7 390 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 TSPYL2Q9H2G4 693 aaPredicted RBP17.65■□□□□ 0.42
NUP54-205ENST00000507257 TFB2MQ9H5Q4 396 aaKnown RBP17.65■□□□□ 0.42
NUP54-205ENST00000507257 RMND5AQ9H871 391 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 NECTIN3Q9NQS3 549 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 FAM118AQ9NWS6 357 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 OSER1Q9NX31 292 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 ANKMY1Q9P2S6 941 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 MTRRQ9UBK8 725 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 DSEQ9UL01 958 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 BAG5Q9UL15 447 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
NUP54-205ENST00000507257 DFFAO00273 331 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 TBC1D4O60343 1298 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 HLA-DQB2P05538 268 aa17.64■□□□□ 0.42
NUP54-205ENST00000507257 PGK2P07205 417 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms