RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ATP6V0D2Q8N8Y2 350 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 TDRD5Q8NAT2 981 aaKnown RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 ATP6V1E2Q96A05 226 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 TEKT5Q96M29 485 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 APOL5Q9BWW9 433 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ZNF717Q9BY31 904 aaPredicted RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 CRISPLD1Q9H336 500 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 GIMAP2Q9UG22 337 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 CENPBD1B2RD01 187 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 GABRDO14764 452 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 AP2A1O95782 977 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ZNF23P17027 643 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 PTPN7P35236 360 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 NOGQ13253 232 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 SGO1Q5FBB7 561 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 RARS2Q5T160 578 aaKnown RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 ARMC12Q5T9G4 340 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP11-206ENST00000469080 SNX29P2Q8IUI4 249 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 TBC1D15Q8TC07 691 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ARNTL2Q8WYA1 636 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ACE2Q9BYF1 805 aaPredicted RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 ATP13A1Q9HD20 1204 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 STMN3Q9NZ72 180 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 SRRDQ9UH36 339 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ACOT9Q9Y305 439 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 F5H5T6 163 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 DCLK1O15075 740 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 ATE1O95260 518 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 AHSGP02765 367 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 FMO4P31512 558 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 HARS2P49590 506 aaKnown RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 DSTNP60981 165 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 MRPS15P82914 257 aaKnown RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 MAPK11Q15759 364 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 FGD3Q5JSP0 725 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 DEFB107AQ8IZN7 70 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 CDC26Q8NHZ8 85 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 TRIT1Q9H3H1 467 aaKnown RBP12.3□□□□□ -0.44
USP11-206ENST00000469080 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 EPS15L1Q9UBC2 864 aa12.3□□□□□ -0.44
USP11-206ENST00000469080 HMX2A2RU54 273 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 E7ESA3 106 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 DENRO43583 198 aaKnown RBP12.29□□□□□ -0.44
USP11-206ENST00000469080 IDH3BO43837 385 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 TPST1O60507 370 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 ADAMTS4O75173 837 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 CHRM3P20309 590 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 IL32P24001 234 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 GRIA4P48058 902 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 TAS2R39P59534 338 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 ZCCHC8Q6NZY4 707 aaKnown RBP12.29□□□□□ -0.44
USP11-206ENST00000469080 SERPINB11Q96P15 392 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 RUBCNLQ9H714 662 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 TLR9Q9NR96 1032 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 DDX28Q9NUL7 540 aaKnown RBP12.29□□□□□ -0.44
USP11-206ENST00000469080 VPS28Q9UK41 221 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 HACD1B0YJ81 288 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 PLIN3O60664 434 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 CD247P20963 164 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 NDST2P52849 883 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 APOFQ13790 326 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 TCEA2Q15560 299 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 PIK3R6Q5UE93 754 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 PDPK2PQ6A1A2 396 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 CLEC6AQ6EIG7 209 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 ADGRG6Q86SQ4 1221 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 TDRPQ86YL5 185 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 PIWIL2Q8TC59 973 aaKnown RBP12.29□□□□□ -0.44
USP11-206ENST00000469080 ATL1Q8WXF7 558 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 TLR8Q9NR97 1041 aaKnown RBP12.29□□□□□ -0.44
USP11-206ENST00000469080 TAGLN3Q9UI15 199 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 FBXO5Q9UKT4 447 aa12.29□□□□□ -0.44
USP11-206ENST00000469080 KCNU1A8MYU2 1149 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 SNAP91O60641 907 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 KPNA6O60684 536 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 TCEA3O75764 348 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ANXA9O76027 345 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ART3Q13508 389 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 RSPO2Q6UXX9 243 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 PCDH20Q8N6Y1 951 aaKnown RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 ZNF398Q8TD17 642 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ZFYVE19Q96K21 471 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 RANBP9Q96S59 729 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 CCDC167Q9P0B6 97 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 SEMA3DO95025 777 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 GUCA1CO95843 209 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 ATF4P18848 351 aaPredicted RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 TPSB2P20231 275 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 MAP4P27816 1152 aaKnown RBP12.28□□□□□ -0.44
USP11-206ENST00000469080 DPYSQ14117 519 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 TPSAB1Q15661 275 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
USP11-206ENST00000469080 CES4AQ5XG92 561 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms