RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMPRSS7Q7RTY8 843 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 EFL1Q7Z2Z2 1120 aaKnown RBP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 TAF8Q7Z7C8 310 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 GALNT13Q8IUC8 556 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 GALNT15Q8N3T1 639 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 CCL4L1Q8NHW4 92 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 MAIP1Q8WWC4 291 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 SCG3Q8WXD2 468 aaKnown RBP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 SCARF2Q96GP6 870 aaPredicted RBP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 GSDMCQ9BYG8 508 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 LRRC40Q9H9A6 602 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 TRNAU1APQ9NX07 287 aaKnown RBP12.8□□□□□ -0.36
COL5A1-206ENST00000465877 IL17CQ9P0M4 197 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 GPR34Q9UPC5 381 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 TMEM98Q9Y2Y6 226 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 MSRB2Q9Y3D2 182 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ARL5AQ9Y689 179 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 ZFHX4Q86UP3 3567 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 LAMA5O15230 3695 aa12.8□□□□□ -0.36
COL5A1-206ENST00000465877 TPRP12270 2363 aaKnown RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 FAM221BA6H8Z2 402 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 GPR39O43194 453 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 BUD23O43709 281 aaKnown RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 CEP104O60308 925 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 AP2A1O95782 977 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 IFNB1P01574 187 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 AK4P27144 223 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 ADCY8P40145 1251 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 RPIAP49247 311 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 SPARCL1Q14515 664 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 LONRF2Q1L5Z9 754 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 ZDHHC20Q5W0Z9 365 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 SLC30A9Q6PML9 568 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 FAM151BQ6UXP7 276 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 SLC35F6Q8N357 371 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 TAB3Q8N5C8 712 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 GPBAR1Q8TDU6 330 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 GATA6Q92908 595 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 NAT6Q93015 286 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 GLYATL1Q969I3 302 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 VPS35Q96QK1 796 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 PKP3Q9Y446 797 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 PCYT1BQ9Y5K3 369 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-206ENST00000465877 ST14Q9Y5Y6 855 aa12.79□□□□□ -0.36
COL5A1-206ENST00000465877 ZZEF1O43149 2961 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 GLYATL1P3A0A0U1RQE8 302 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 CPED1A4D0V7 1026 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 USP27XA6NNY8 438 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 KIF5CO60282 957 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 NOBOXO60393 691 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 DNAJC6O75061 913 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 PPFIA2O75334 1257 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 SLC25A14O95258 325 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 ACTN2P35609 894 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 ACTR1BP42025 376 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 ACTR1AP61163 376 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 INSM1Q01101 510 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 CTBSQ01459 385 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 TAF1AQ15573 450 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 CCNG2Q16589 344 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 ATP13A5Q4VNC0 1218 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 PYCR3Q53H96 274 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 PERM1Q5SV97 790 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 DENND5AQ6IQ26 1287 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 NRROSQ86YC3 692 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 CCDC89Q8N998 374 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 FAM46DQ8NEK8 389 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 GPR156Q8NFN8 814 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 GULP1Q9UBP9 304 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-206ENST00000465877 GPSM3Q9Y4H4 160 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 DMXL2Q8TDJ6 3036 aa12.78□□□□□ -0.36
COL5A1-206ENST00000465877 EPG5Q9HCE0 2579 aa12.77□□□□□ -0.36
COL5A1-206ENST00000465877 PIKFYVEQ9Y2I7 2098 aa12.77□□□□□ -0.36
COL5A1-206ENST00000465877 C2orf81A6NN90 581 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 C1QTNF9BB2RNN3 333 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 GPR89AB7ZAQ6 455 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 GAPDHSO14556 408 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-206ENST00000465877 STX7O15400 261 aaKnown RBP12.77□□□□□ -0.37
COL5A1-206ENST00000465877 PRAMEF1O95521 474 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 GPR89BP0CG08 455 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 ETS1P14921 441 aa12.77□□□□□ -0.37
COL5A1-206ENST00000465877 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms