RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 NDUFAB1O14561 156 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 IKBKBO14920 756 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 EIF3HO15372 352 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 LIASO43766 372 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 STX10O60499 249 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZC3H11AO75152 810 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 GFPT2O94808 682 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CLDN7O95471 211 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 FGBP02675 491 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 EIF2S1P05198 315 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 SCP2P22307 547 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CHMLP26374 656 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CDAP32320 146 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 PBX3P40426 434 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 MMP13P45452 471 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CDH12P55289 794 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 HDAC4P56524 1084 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 TWISTNBQ3B726 338 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 WLSQ5T9L3 541 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZNF626Q68DY1 528 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 NCEH1Q6PIU2 408 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 IKBIPQ70UQ0 350 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 GSTA5Q7RTV2 222 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 PIP4P1Q86T03 277 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 LURAP1LQ8IV03 231 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 MFN1Q8IWA4 741 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC170Q8IYT3 715 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 RBFAQ8N0V3 343 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 FRMD1Q8N878 549 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 GJC3Q8NFK1 279 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC26Q8TAB7 109 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 OTULINQ96BN8 352 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZC3HAV1LQ96H79 300 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 TTC14Q96N46 770 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 YME1L1Q96TA2 773 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 WDR77Q9BQA1 342 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 MOV10L1Q9BXT6 1211 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CAPS2Q9BXY5 557 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CDT1Q9H211 546 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 GHITMQ9H3K2 345 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 SYNCQ9H7C4 482 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 VCPKMTQ9H867 229 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 FZD3Q9NPG1 666 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 ASAH2Q9NR71 780 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 DECR2Q9NUI1 292 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 SEPT11Q9NVA2 429 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 TRNAU1APQ9NX07 287 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 CHCHD3Q9NX63 227 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 ANKRD10Q9NXR5 420 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 TUBA8Q9NY65 449 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 HMG20BQ9P0W2 317 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 STK26Q9P289 416 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 ZNF70Q9UC06 446 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 NDRG3Q9UGV2 375 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 MKLN1Q9UL63 735 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 COG5Q9UP83 839 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 GPR34Q9UPC5 381 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 BTBD3Q9Y2F9 522 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 PPP2R2CQ9Y2T4 447 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 USP16Q9Y5T5 823 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 OVOS2A0A0G2JMS6 1433 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 OVOS2A0A0J9YW53 1432 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 OVOS2Q6IE36 1432 aa4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 PHRF1Q9P1Y6 1649 aaKnown RBP4.54□□□□□ -1.68
HMGB1P16-201ENST00000447155 UTYO14607 1347 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CDHR2Q9BYE9 1310 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 DDX60Q8IY21 1712 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM237BA0A1B0GVD1 139 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 HSPB2A8KAH6 182 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 AP3D1O14617 1153 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 BCAT2O15382 392 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SEC14L5O43304 696 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 AHCYL1O43865 530 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 ATP2C2O75185 946 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CHRNB2P17787 502 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 ALOX12P18054 663 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 FBLP22087 321 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 TM4SF1P30408 202 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CLCN5P51795 746 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 MYL5Q02045 173 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 FAM27E3Q08E93 113 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 FRG1Q14331 258 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 LPIN1Q14693 890 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 RBMS2Q15434 407 aaKnown RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 MED22Q15528 200 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 HSPB2Q16082 182 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC40Q4G0X9 1142 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 EPHA10Q5JZY3 1008 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 BEND6Q5SZJ8 279 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CES5AQ6NT32 575 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SHC4Q6S5L8 630 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CYP20A1Q6UW02 462 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 OLFM4Q6UX06 510 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC129Q6ZRS4 1044 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 CCDC121Q6ZUS5 278 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 C11orf57Q6ZUT1 292 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 TRAPPC11Q7Z392 1133 aa4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 SDCCAG8Q86SQ7 713 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P16-201ENST00000447155 DHX40Q8IX18 779 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms