RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 V9GYY5 206 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P10-201ENST00000434734 TRIM49BA6NDI0 452 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 C3orf70A6NLC5 250 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 PLK4O00444 970 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 FFAR3O14843 346 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 GPR42O15529 346 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 LANCL1O43813 399 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 DAB1O75553 588 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CYP1A2P05177 515 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 RNASE1P07998 156 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SPATA31D3P0C874 917 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ITGAXP20702 1163 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ALDH4A1P30038 563 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CDC25CP30307 473 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 PPIFP30405 207 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 TIA1P31483 386 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 MCM5P33992 734 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 TRHRP34981 398 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 HSD17B2P37059 387 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 WNT5AP41221 380 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SERPINH1P50454 418 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 PRRX1P54821 245 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SRP54P61011 504 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 GALK2Q01415 458 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CHRNEQ04844 493 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 RELQ04864 619 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 PIGFQ07326 219 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 NAB2Q15742 525 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 HADHQ16836 314 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 USH1GQ495M9 461 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CCDC152Q4G0S7 254 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CDONQ4KMG0 1287 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 KLHL26Q53HC5 615 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ARHGAP17Q68EM7 881 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 WBP2NLQ6ICG8 309 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SPATA31D4Q6ZUB0 917 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 C11orf57Q6ZUT1 292 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ATG9AQ7Z3C6 839 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CARFQ8N187 725 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ENDOVQ8N8Q3 282 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 DNAAF1Q8NEP3 725 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ZNF483Q8TF39 744 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SHISA4Q96DD7 197 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 EEF2KMTQ96G04 330 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 NSMCE2Q96MF7 247 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SECISBP2Q96T21 854 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 EGFL8Q99944 293 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 EGLN1Q9GZT9 426 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 RAB17Q9H0T7 212 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CDCP1Q9H5V8 836 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ECT2Q9H8V3 914 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 RNPEPL1Q9HAU8 725 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 PCDH18Q9HCL0 1135 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 GPN1Q9HCN4 374 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 FAM30AQ9NZY2 134 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CTTNBP2NLQ9P2B4 639 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 BAIAP2L1Q9UHR4 511 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ATP6V1HQ9UI12 483 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 SLC25A13Q9UJS0 675 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 CROTQ9UKG9 612 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ADAMTS6Q9UKP5 1117 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 DTX4Q9Y2E6 619 aa5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 NOSIPQ9Y314 301 aaKnown RBP5.3□□□□□ -1.56
HMGB3P10-201ENST00000434734 ASTN2O75129 1339 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 ZNF644Q9H582 1327 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 A0A087WZY1 265 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TRBV2A0A0J9YWF9 115 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TARSL2A2RTX5 802 aaKnown RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 FAM47DPA6NHR8 397 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 ARHGAP42A6NI28 874 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 E9PBE3 544 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TRIM77I1YAP6 450 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 HRKO00198 91 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 POLR3GO15318 223 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 SLC16A3O15427 465 aaKnown RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 RNF113AO15541 343 aaKnown RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TOMM70O94826 608 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 CHRM2P08172 466 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TPM1P09493 284 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 THRBP10828 461 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 PKMP14618 531 aaKnown RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 IGFBP2P18065 325 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 ACADLP28330 430 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 PTPN6P29350 595 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 PCGF2P35227 344 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 IGHMBP2P38935 993 aaKnown RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 ARL4AP40617 200 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 ETV4P43268 484 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 SMSP52788 366 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 DGKQP52824 942 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TNFRSF17Q02223 184 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 TAP2Q03519 686 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 SNTB2Q13425 540 aaKnown RBP5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 RIN1Q13671 783 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 ZMYND11Q15326 602 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 BMT2Q1RMZ1 405 aa5.29□□□□□ -1.56
HMGB3P10-201ENST00000434734 PLEKHN1Q494U1 663 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms