RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 M0QYV0 167 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 SHOXO15266 292 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 HUS1O60921 280 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 CPNE3O75131 537 aaKnown RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 S100A5P33763 92 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 KCNAB2Q13303 367 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 GRAPQ13588 217 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 TPRG1LQ5T0D9 272 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 CUZD1Q86UP6 607 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 ABI1Q8IZP0 508 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 HS3ST5Q8IZT8 346 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 FBXL6Q8N531 539 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 GRAPLQ8TC17 118 aaPredicted RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 BPIFB1Q8TDL5 484 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 GTF2H4Q92759 462 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 CCDC120Q96HB5 630 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 ZNF670Q9BS34 389 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 ENPP3O14638 875 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 ARHGEF15O94989 841 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 FADS2O95864 444 aaKnown RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 DBTP11182 482 aaKnown RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 ACVR2AP27037 513 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 MASP1P48740 699 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 DEFA1P59665 94 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 DEFA3P59666 94 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 LIPEQ05469 1076 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 TRAF3Q13114 568 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 TOP3AQ13472 1001 aaPredicted RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 CLCA4Q14CN2 919 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 FUT11Q495W5 492 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 OR6B2Q6IFH4 312 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 NOXA1Q86UR1 476 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 KIAA1958Q8N8K9 716 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 APPL2Q8NEU8 664 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 TMEM125Q96AQ2 219 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 GPR22Q99680 433 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 LRRC4Q9HBW1 653 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 EIF2B3Q9NR50 452 aaKnown RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 TRMT13Q9NUP7 481 aaKnown RBP12.74□□□□□ -0.37
HERC3-203ENST00000407637 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 DTLQ9NZJ0 730 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 COL20A1Q9P218 1284 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 HMGXB4Q9UGU5 601 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 PCDHA9Q9Y5H5 950 aa12.74□□□□□ -0.37
HERC3-203ENST00000407637 EFCAB9A8MZ26 197 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 TSPAN1O60635 241 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 MICAL2O94851 1124 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PGK1P00558 417 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 YES1P07947 543 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 MSL3P1P0C860 447 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 DNAJB1P25685 340 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 CD6P30203 668 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 UQCRC1P31930 480 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 TNFSF9P41273 254 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 CSRP3P50461 194 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 AP2S1P53680 142 aaPredicted RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 JAG1P78504 1218 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 TAGLNQ01995 201 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 TARDBPQ13148 414 aaKnown RBP eCLIP12.73□□□□□ -0.37
HERC3-203ENST00000407637 KRR1Q13601 381 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 MTMR1Q13613 665 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PSMD5Q16401 504 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 BOLA3Q53S33 107 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 NOL9Q5SY16 702 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 KIAA1841Q6NSI8 718 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 CES5AQ6NT32 575 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 C15orf52Q6ZUT6 534 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 FAM183BPQ6ZVS7 135 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 HORMAD1Q86X24 394 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 UBA3Q8TBC4 463 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 NSUN6Q8TEA1 469 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.73□□□□□ -0.37
HERC3-203ENST00000407637 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 BEX2Q9BXY8 128 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 MMP27Q9H306 513 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 ANKHQ9HCJ1 492 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PRDM8Q9NQV8 689 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 NDUFAF1Q9Y375 327 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
HERC3-203ENST00000407637 H0Y626 953 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 TRIM77I1YAP6 450 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 OGTO15294 1046 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 MED7O43513 233 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PRKD3O94806 890 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 EDN1P05305 212 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 UMPSP11172 480 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 PRKACAP17612 351 aa12.73□□□□□ -0.37
HERC3-203ENST00000407637 HRH2P25021 359 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms