RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TFAP2DQ7Z6R9 452 aa17.74■□□□□ 0.43
APP-202ENST00000348990 CNTN4Q8IWV2 1026 aa17.74■□□□□ 0.43
APP-202ENST00000348990 PNPT1Q8TCS8 783 aaKnown RBP17.74■□□□□ 0.43
APP-202ENST00000348990 BLOC1S5Q8TDH9 187 aa17.74■□□□□ 0.43
APP-202ENST00000348990 TEX37Q96LM6 180 aa17.74■□□□□ 0.43
APP-202ENST00000348990 SLC2A13Q96QE2 648 aa17.74■□□□□ 0.43
APP-202ENST00000348990 FCRL5Q96RD9 977 aa17.74■□□□□ 0.43
APP-202ENST00000348990 TOR3AQ9H497 397 aa17.74■□□□□ 0.43
APP-202ENST00000348990 SOBPA7XYQ1 873 aa17.74■□□□□ 0.43
APP-202ENST00000348990 SNX2O60749 519 aa17.74■□□□□ 0.43
APP-202ENST00000348990 CHEK2O96017 543 aa17.74■□□□□ 0.43
APP-202ENST00000348990 HPCAL1P37235 193 aa17.74■□□□□ 0.43
APP-202ENST00000348990 TPTEP56180 551 aa17.74■□□□□ 0.43
APP-202ENST00000348990 COLGALT2Q8IYK4 626 aa17.74■□□□□ 0.43
APP-202ENST00000348990 FNDC5Q8NAU1 212 aa17.74■□□□□ 0.43
APP-202ENST00000348990 OR7A2PQ8NGA2 310 aa17.74■□□□□ 0.43
APP-202ENST00000348990 MAGED4Q96JG8 741 aa17.74■□□□□ 0.43
APP-202ENST00000348990 PRKD2Q9BZL6 878 aa17.74■□□□□ 0.43
APP-202ENST00000348990 FAM32AQ9Y421 112 aaKnown RBP17.74■□□□□ 0.43
APP-202ENST00000348990 HS6ST1O60243 411 aa17.73■□□□□ 0.43
APP-202ENST00000348990 DNAJB1P25685 340 aa17.73■□□□□ 0.43
APP-202ENST00000348990 SERPINH1P50454 418 aaKnown RBP17.73■□□□□ 0.43
APP-202ENST00000348990 VGLL4Q14135 290 aa17.73■□□□□ 0.43
APP-202ENST00000348990 INAQ16352 499 aa17.73■□□□□ 0.43
APP-202ENST00000348990 INTS6LQ5JSJ4 861 aaKnown RBP17.73■□□□□ 0.43
APP-202ENST00000348990 SMYD5Q6GMV2 418 aa17.73■□□□□ 0.43
APP-202ENST00000348990 TMEM207Q6UWW9 146 aa17.73■□□□□ 0.43
APP-202ENST00000348990 DNAJC14Q6Y2X3 702 aaPredicted RBP17.73■□□□□ 0.43
APP-202ENST00000348990 PAQR9Q6ZVX9 377 aa17.73■□□□□ 0.43
APP-202ENST00000348990 FRA10AC1Q70Z53 315 aa17.73■□□□□ 0.43
APP-202ENST00000348990 TAC4Q86UU9 113 aa17.73■□□□□ 0.43
APP-202ENST00000348990 SH3YL1Q96HL8 342 aaPredicted RBP17.73■□□□□ 0.43
APP-202ENST00000348990 ZNF347Q96SE7 839 aa17.73■□□□□ 0.43
APP-202ENST00000348990 TUBA1CQ9BQE3 449 aa17.73■□□□□ 0.43
APP-202ENST00000348990 MARCH4Q9P2E8 410 aaPredicted RBP17.73■□□□□ 0.43
APP-202ENST00000348990 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
APP-202ENST00000348990 RNF112Q9ULX5 631 aa17.73■□□□□ 0.43
APP-202ENST00000348990 PDE10AQ9Y233 779 aa17.73■□□□□ 0.43
APP-202ENST00000348990 ZNF638Q14966 1978 aaKnown RBP17.73■□□□□ 0.43
APP-202ENST00000348990 TRIM32Q13049 653 aa17.73■□□□□ 0.43
APP-202ENST00000348990 DAG1Q14118 895 aa17.73■□□□□ 0.43
APP-202ENST00000348990 SLC2A7Q6PXP3 512 aa17.73■□□□□ 0.43
APP-202ENST00000348990 NANOGNBQ7Z5D8 188 aa17.73■□□□□ 0.43
APP-202ENST00000348990 SAPCD2Q86UD0 394 aa17.73■□□□□ 0.43
APP-202ENST00000348990 NCLNQ969V3 563 aa17.73■□□□□ 0.43
APP-202ENST00000348990 C17orf80Q9BSJ5 609 aa17.73■□□□□ 0.43
APP-202ENST00000348990 TXNRD2Q9NNW7 524 aa17.73■□□□□ 0.43
APP-202ENST00000348990 PALMDQ9NP74 551 aa17.73■□□□□ 0.43
APP-202ENST00000348990 ABCD2Q9UBJ2 740 aa17.73■□□□□ 0.43
APP-202ENST00000348990 ZNF112Q9UJU3 913 aa17.73■□□□□ 0.43
APP-202ENST00000348990 ANK1P16157 1881 aa17.73■□□□□ 0.43
APP-202ENST00000348990 SLC22A3O75751 556 aa17.73■□□□□ 0.43
APP-202ENST00000348990 INMTO95050 263 aa17.73■□□□□ 0.43
APP-202ENST00000348990 AGXTP21549 392 aa17.73■□□□□ 0.43
APP-202ENST00000348990 PRKACGP22612 351 aa17.73■□□□□ 0.43
APP-202ENST00000348990 AXLP30530 894 aa17.73■□□□□ 0.43
APP-202ENST00000348990 PNPLA4P41247 253 aa17.73■□□□□ 0.43
APP-202ENST00000348990 ARSDP51689 593 aa17.73■□□□□ 0.43
APP-202ENST00000348990 FAM98BQ52LJ0 330 aaKnown RBP17.73■□□□□ 0.43
APP-202ENST00000348990 BLOC1S3Q6QNY0 202 aa17.73■□□□□ 0.43
APP-202ENST00000348990 PHIPQ8WWQ0 1821 aa17.73■□□□□ 0.43
APP-202ENST00000348990 TBATAQ96M53 351 aa17.73■□□□□ 0.43
APP-202ENST00000348990 ZFP42Q96MM3 310 aa17.73■□□□□ 0.43
APP-202ENST00000348990 TBCDQ9BTW9 1192 aa17.73■□□□□ 0.43
APP-202ENST00000348990 THUMPD3Q9BV44 507 aaKnown RBP17.73■□□□□ 0.43
APP-202ENST00000348990 NDFIP2Q9NV92 336 aa17.73■□□□□ 0.43
APP-202ENST00000348990 LIMD1Q9UGP4 676 aa17.73■□□□□ 0.43
APP-202ENST00000348990 A0A1W2PP18 115 aa17.72■□□□□ 0.43
APP-202ENST00000348990 MSI1O43347 362 aaKnown RBP17.72■□□□□ 0.43
APP-202ENST00000348990 CYBBP04839 570 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ADCYAP1R1P41586 468 aa17.72■□□□□ 0.43
APP-202ENST00000348990 CSRP3P50461 194 aa17.72■□□□□ 0.43
APP-202ENST00000348990 SEMA3BQ13214 749 aa17.72■□□□□ 0.43
APP-202ENST00000348990 SNX17Q15036 470 aa17.72■□□□□ 0.43
APP-202ENST00000348990 PLA2G4EQ3MJ16 856 aa17.72■□□□□ 0.43
APP-202ENST00000348990 PAN2Q504Q3 1202 aaKnown RBP17.72■□□□□ 0.43
APP-202ENST00000348990 C8orf82Q6P1X6 216 aaPredicted RBP17.72■□□□□ 0.43
APP-202ENST00000348990 SPARTQ8N0X7 666 aa17.72■□□□□ 0.43
APP-202ENST00000348990 FBXO39Q8N4B4 442 aa17.72■□□□□ 0.43
APP-202ENST00000348990 SCAIQ8N9R8 606 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ZFP90Q8TF47 636 aa17.72■□□□□ 0.43
APP-202ENST00000348990 STON2Q8WXE9 905 aa17.72■□□□□ 0.43
APP-202ENST00000348990 HTRA1Q92743 480 aa17.72■□□□□ 0.43
APP-202ENST00000348990 MRGPRX2Q96LB1 330 aa17.72■□□□□ 0.43
APP-202ENST00000348990 YTHDF1Q9BYJ9 559 aaKnown RBP17.72■□□□□ 0.43
APP-202ENST00000348990 TRIM54Q9BYV2 358 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ELP3Q9H9T3 547 aa17.72■□□□□ 0.43
APP-202ENST00000348990 LEF1Q9UJU2 399 aaPredicted RBP17.72■□□□□ 0.43
APP-202ENST00000348990 PNMA8BQ9ULN7 279 aaPredicted RBP17.72■□□□□ 0.43
APP-202ENST00000348990 PCDHB3Q9Y5E6 796 aa17.72■□□□□ 0.43
APP-202ENST00000348990 G3V2T6 193 aa17.72■□□□□ 0.43
APP-202ENST00000348990 PIRO00625 290 aa17.72■□□□□ 0.43
APP-202ENST00000348990 MYO1DO94832 1006 aa17.72■□□□□ 0.43
APP-202ENST00000348990 C1RP00736 705 aa17.72■□□□□ 0.43
APP-202ENST00000348990 CCNCP24863 283 aa17.72■□□□□ 0.43
APP-202ENST00000348990 HCAR3P49019 387 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ATP4BP51164 291 aa17.72■□□□□ 0.43
APP-202ENST00000348990 IL5RAQ01344 420 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ATP6AP1LQ52LC2 224 aa17.72■□□□□ 0.43
APP-202ENST00000348990 ABI1Q8IZP0 508 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms