RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SGCBQ16585 318 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 CPTPQ5TA50 214 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 OGFOD2Q6N063 350 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 NEPROQ6NW34 567 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 OR4C6Q8NH72 309 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 MCCC1Q96RQ3 725 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
PTCH1-201ENST00000331920 FBXO9Q9UK97 447 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 MRPS33Q9Y291 106 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 MRPS23Q9Y3D9 190 aaKnown RBP16.35■□□□□ 0.21
PTCH1-201ENST00000331920 PDCD5O14737 125 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 THEGLP0DJG4 465 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 NDUFV1P49821 464 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 UNC5AQ6ZN44 842 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 ARMC5Q96C12 935 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 GORASP1Q9BQQ3 440 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 AURKAO14965 403 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 BANF1O75531 89 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 TRBC1P01850 177 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 RYKP34925 604 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 IRF2BPLQ9H1B7 796 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 TCF7L1Q9HCS4 588 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 FBXL3Q9UKT7 428 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 BCKDKO14874 412 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 SCAMP1O15126 338 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 CTNNB1P35222 781 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 SMG7Q92540 1137 aaKnown RBP16.34■□□□□ 0.21
PTCH1-201ENST00000331920 BRF2Q9HAW0 419 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF490Q9ULM2 529 aaPredicted RBP16.34■□□□□ 0.21
PTCH1-201ENST00000331920 CCNOP22674 350 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 EPHA3P29320 983 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 ARFRP1Q13795 201 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
PTCH1-201ENST00000331920 STRA6Q9BX79 667 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 ASAH2Q9NR71 780 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 MYH6P13533 1939 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 RPS2P15880 293 aaKnown RBP16.34■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF20P17024 532 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 PTENP60484 403 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 EXOSC8Q96B26 276 aaKnown RBP16.34■□□□□ 0.21
PTCH1-201ENST00000331920 LACTBL1A8MY62 500 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 C22orf31O95567 290 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 OTCP00480 354 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 LAMP2P13473 410 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 RAB39AQ14964 217 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 C6orf52Q5T4I8 152 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 LYPLAL1Q5VWZ2 237 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 HSDL2Q6YN16 418 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 GPR152Q8TDT2 470 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 TAPBPLQ9BX59 468 aa16.34■□□□□ 0.21
PTCH1-201ENST00000331920 C13orf42A0A1B0GVH6 325 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 CCNB1P14635 433 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 IGFBP5P24593 272 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 HSD11B1P28845 292 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 AHSA2Q719I0 299 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 PSTKQ8IV42 348 aaKnown RBP16.33■□□□□ 0.21
PTCH1-201ENST00000331920 ZNF570Q96NI8 536 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 ABCC13Q9NSE7 274 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 AP1M2Q9Y6Q5 423 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 TMEM94Q12767 1356 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 NKAPQ8N5F7 415 aaKnown RBP16.33■□□□□ 0.21
PTCH1-201ENST00000331920 TEX19Q8NA77 164 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 ERGIC2Q96RQ1 377 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 FUT8Q9BYC5 575 aa16.33■□□□□ 0.21
PTCH1-201ENST00000331920 RGL2O15211 777 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 UGT2B11O75310 529 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 SPATA31D3P0C874 917 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
PTCH1-201ENST00000331920 ITGA7Q13683 1181 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 FAM153CQ494X1 144 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 GPR139Q6DWJ6 353 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 SLC8B1Q6J4K2 584 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 SPATA31D4Q6ZUB0 917 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 BORCS8Q96FH0 119 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 SAR1AQ9NR31 198 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 BLOC1S4Q9NUP1 217 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 NR1H2P55055 460 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 DPYSL3Q14195 570 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 MCOLN2Q8IZK6 566 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 RCN3Q96D15 328 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 TRPV4Q9HBA0 871 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 ACSS2Q9NR19 701 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
PTCH1-201ENST00000331920 FOXM1Q08050 763 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 NFIXQ14938 502 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 EGFLAMQ63HQ2 1017 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 LPIN3Q9BQK8 851 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 OR12D3Q9UGF7 316 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 HACD1B0YJ81 288 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 NEDD8-MDP1E9PL57 170 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 HMBOX1Q6NT76 420 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 ARSKQ6UWY0 536 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 METTL7BQ6UX53 244 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 KATNAL2Q8IYT4 538 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 SLC43A3Q8NBI5 491 aa16.33■□□□□ 0.2
PTCH1-201ENST00000331920 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
PTCH1-201ENST00000331920 GATAD2BQ8WXI9 593 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms