RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ATAD3BQ5T9A4 648 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 ARHGAP17Q68EM7 881 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 VASH1Q7L8A9 365 aaPredicted RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 MMAAQ8IVH4 418 aaKnown RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 LINC01465Q8N7H1 131 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 Q8N9G6 341 aaPredicted RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 BPIFB1Q8TDL5 484 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 NDRG1Q92597 394 aaKnown RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 TRIM54Q9BYV2 358 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 HOXD1Q9GZZ0 328 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 NACA2Q9H009 215 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 DPEP3Q9H4B8 488 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 NTN4Q9HB63 628 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 FBXO8Q9NRD0 319 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 GDAP2Q9NXN4 497 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 TRHDEQ9UKU6 1024 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 H3BRB1 525 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 DEAF1O75398 565 aaPredicted RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 INMTO95050 263 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 GABARAPL2P60520 117 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 MAPK11Q15759 364 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 CCL14Q16627 93 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 PAGE2BQ5JRK9 111 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 PCID2Q5JVF3 399 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 ESRP1Q6NXG1 681 aaKnown RBP17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 BIRC7Q96CA5 298 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 PARVBQ9HBI1 364 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 PDE10AQ9Y233 779 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 PTGDR2Q9Y5Y4 395 aa17.61■□□□□ 0.41
CDKN1B-201ENST00000228872 ANKRD34BA5PLL1 514 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 FAM72CH0Y354 149 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 HCRTO43612 131 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 HUS1O60921 280 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 ALPLP05186 524 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 CPB1P15086 417 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 ITIH1P19827 911 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 SERPINB1P30740 379 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 POU4F1Q01851 419 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 DMPKQ09013 629 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 GRB7Q14451 532 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 GEN1Q17RS7 908 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 PRAMEF19Q5SWL8 479 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 C6orf141Q5SZD1 244 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 RBM20Q5T481 1227 aaKnown RBP17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 FAM72AQ5TYM5 149 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 AGAP9Q5VTM2 703 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 FAM72DQ6L9T8 149 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 UGT3A1Q6NUS8 523 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 PDZD4Q76G19 769 aaPredicted RBP17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 FAM72BQ86X60 149 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 NPWQ8N729 165 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 CHDHQ8NE62 594 aaPredicted RBP17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 DNAJB14Q8TBM8 379 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 FAM149B1Q96BN6 582 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 TRMOQ9BU70 441 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 ZNF229Q9UJW7 825 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 PCDHGA8Q9Y5G5 932 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 OAS3Q9Y6K5 1087 aaKnown RBP17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 CITO14578 2027 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 NRCAMQ92823 1304 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 UPK1AO00322 258 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 NUAK1O60285 661 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 TCF3P15923 654 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 CTGFP29279 349 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 RPL34P49207 117 aaKnown RBP17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 ADAM17P78536 824 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 AKAP14Q86UN6 197 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 ARMC8Q8IUR7 673 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC22A9Q8IVM8 553 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 DCP1BQ8IZD4 617 aaKnown RBP17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 OR6Q1Q8NGQ2 317 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 CAPSLQ8WWF8 208 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 RNF145Q96MT1 663 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 NFKBIZQ9BYH8 718 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC52A3Q9NQ40 469 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 AKT3Q9Y243 479 aa17.6■□□□□ 0.41
CDKN1B-201ENST00000228872 ZNF638Q14966 1978 aaKnown RBP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 A0A087WZ62 844 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 AP3B1O00203 1094 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 GABARAPO95166 117 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 NADKO95544 446 aaPredicted RBP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 IMPDH1P20839 514 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 NKX2-5P52952 324 aaPredicted RBP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 BCAT1P54687 386 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 NFYCQ13952 458 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 POU6F1Q14863 301 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 MEP1AQ16819 746 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 RIMKLAQ8IXN7 391 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 CLEC4FQ8N1N0 589 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 C2CD4AQ8NCU7 369 aaPredicted RBP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 OR7A2PQ8NGA2 310 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 TXNDC15Q96J42 360 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 FDXACB1Q9BRP7 624 aaPredicted RBP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 PRMT7Q9NVM4 692 aaPredicted RBP17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 SLC2A6Q9UGQ3 507 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 USP22Q9UPT9 525 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 Q9Y3F1 56 aa17.59■□□□□ 0.41
CDKN1B-201ENST00000228872 MAGED1Q9Y5V3 778 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms