RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 YY2O15391 372 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 ASMTLO95671 621 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 CRTAMO95727 393 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 SOD1P00441 154 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 CEACAM5P06731 702 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 IVLP07476 585 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 PMLP29590 882 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 GDF10P55107 478 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 FOXC1Q12948 553 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 DEFB133Q30KQ1 61 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 GSTA5Q7RTV2 222 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 LINC00523Q86TU6 105 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 SLCO6A1Q86UG4 719 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 RASGEF1CQ8N431 466 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 GPR26Q8NDV2 337 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 DTX3LQ8TDB6 740 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 ADAMTS14Q8WXS8 1223 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 EID2BQ96D98 161 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 PDXPQ96GD0 296 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 WDR24Q96S15 920 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 AGAP2Q99490 1192 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 GORASP1Q9BQQ3 440 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 CARS2Q9HA77 564 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 ARNT2Q9HBZ2 717 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 PAK5Q9P286 719 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 PNMA8BQ9ULN7 279 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 TTC7AQ9ULT0 858 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 SLC17A4Q9Y2C5 497 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 TMEM131Q92545 1883 aa17.18■□□□□ 0.34
SHKBP1-212ENST00000596163 CACNA1AO00555 2505 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 E7EVH7 732 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 INPP4BO15327 924 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 STX7O15400 261 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 RFPL3O75679 317 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 METTL18O95568 372 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 GIMD1P0DJR0 217 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 CKMT1AP12532 417 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 BPIP17213 487 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 ACP1P24666 158 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 LMAN1P49257 510 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 SIX1Q15475 284 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 TAF1AQ15573 450 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 DOK6Q6PKX4 331 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 TAF8Q7Z7C8 310 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 TTC30BQ8N4P2 665 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 BRSK1Q8TDC3 778 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 COX14Q96I36 57 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 APOLD1Q96LR9 279 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 CLPBQ9H078 707 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 RMI1Q9H9A7 625 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 MRPL40Q9NQ50 206 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 TRNAU1APQ9NX07 287 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 IL17CQ9P0M4 197 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 VPS18Q9P253 973 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 ANGPTL2Q9UKU9 493 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 PCNX2A6NKB5 2137 aa17.17■□□□□ 0.34
SHKBP1-212ENST00000596163 DCHS1Q96JQ0 3298 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 CES2O00748 559 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 AURKAO14965 403 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 AP2A1O95782 977 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 GAS8O95995 478 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 LPOP22079 712 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 SPAM1P38567 509 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 GNPDA1P46926 289 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 E2F1Q01094 437 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 ILF3Q12906 894 aaKnown RBP eCLIP17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 DNAJC3Q13217 504 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 NR0B2Q15466 257 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 CCDC157Q569K6 752 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 C6orf132Q5T0Z8 1188 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 ALS2CLQ60I27 953 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 KCTD11Q693B1 232 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 PNPLA1Q8N8W4 532 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 SCARF2Q96GP6 870 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 C19orf43Q9BQ61 176 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 APOL2Q9BQE5 337 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 GSDMCQ9BYG8 508 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 BPIFA1Q9NP55 256 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 TOR4AQ9NXH8 423 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 SUFUQ9UMX1 484 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 GPR34Q9UPC5 381 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 TMEM98Q9Y2Y6 226 aa17.16■□□□□ 0.34
SHKBP1-212ENST00000596163 LRRK1Q38SD2 2015 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 FADS2P1A8MWK0 482 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 PGRMC1O00264 195 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 DKK1O94907 266 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 SLC25A14O95258 325 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 ATP1A1P05023 1023 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 POLD2P49005 469 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 ACADVLP49748 655 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 GNG11P61952 73 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 SHC2P98077 582 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 SPARCL1Q14515 664 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 GALNT13Q8IUC8 556 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 PHYKPLQ8IUZ5 450 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 GALNT15Q8N3T1 639 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 GLYATL1Q969I3 302 aa17.15■□□□□ 0.34
SHKBP1-212ENST00000596163 OSBPL9Q96SU4 736 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms