RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ZNF185O15231 689 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 ZSCAN12O43309 604 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 TSPAN6O43657 245 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 LIASO43766 372 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 NRDCO43847 1150 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 METTL18O95568 372 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 ATXN1LP0C7T5 689 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 PIRTP0C851 137 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 ETS1P14921 441 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 HOXD12P35452 270 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 CTSKP43235 329 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 AFF3P51826 1226 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 RPS21P63220 83 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 SNX1Q13596 522 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 PUM1Q14671 1186 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 GRM3Q14832 879 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 SHBQ15464 509 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 WSCD2Q2TBF2 565 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 NAPEPLDQ6IQ20 393 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 KIAA1161Q6NSJ0 714 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 NEK5Q6P3R8 708 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 DARS2Q6PI48 645 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 CRTC1Q6UUV9 634 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 LIPIQ6XZB0 460 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 DPPA4Q7L190 304 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 BBS5Q8N3I7 341 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 FAM71DQ8N9W8 422 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 LPCAT1Q8NF37 534 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 CENPTQ96BT3 561 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 TMEM121Q9BTD3 319 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 EDEM2Q9BV94 578 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 PCDH9Q9HC56 1237 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 AASDHPPTQ9NRN7 309 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 ANKRD6Q9Y2G4 727 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 PPIL1Q9Y3C6 166 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 SPO11Q9Y5K1 396 aa9.48□□□□□ -0.89
NPLOC4-219ENST00000576713 CEP250Q9BV73 2442 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 A0A0J9YYE9 177 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 C4orf47A7E2U8 309 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 NEMP1O14524 444 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 AURKAO14965 403 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 CEP104O60308 925 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FOXD2O60548 495 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FBXO24O75426 580 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 PMPCBO75439 489 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 HEXIM1O94992 359 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 TRBC1P01850 177 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FGGP02679 453 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 C1SP09871 688 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ZSCAN5DPP0CG00 497 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 HNRNPA2B1P22626 353 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 PSMB4P28070 264 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 CD38P28907 300 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 VIPR1P32241 457 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ST13P50502 369 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 RACK1P63244 317 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 IRF4Q15306 451 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 AASDHQ4L235 1098 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 SETMARQ53H47 684 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 RALGPS1Q5JS13 557 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ANKRD20A2Q5SQ80 823 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 CFAP58Q5T655 872 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ARMC12Q5T9G4 340 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 SEL1L2Q5TEA6 688 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FAXCQ5TGI0 409 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ANKRD20A1Q5TYW2 823 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ANKRD20A3Q5VUR7 823 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 TTC27Q6P3X3 843 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 BZW1Q7L1Q6 419 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ERMP1Q7Z2K6 904 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 PID1Q7Z2X4 250 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 ABI3BPQ7Z7G0 1075 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 CDKL3Q8IVW4 592 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 RASGEF1CQ8N431 466 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 TAB3Q8N5C8 712 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 PRELID2Q8N945 189 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 GALNT11Q8NCW6 608 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 CXorf40AQ8TE69 158 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 SCRN2Q96FV2 425 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FEM1CQ96JP0 617 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 COQ10AQ96MF6 247 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FCRL5Q96RD9 977 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 GTPBP2Q9BX10 602 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 GBA3Q9H227 469 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 SOX17Q9H6I2 414 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 GPR27Q9NS67 375 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 KLHL8Q9P2G9 620 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 PHTF1Q9UMS5 762 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 JRKLQ9Y4A0 524 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 TMEM131Q92545 1883 aa9.47□□□□□ -0.89
NPLOC4-219ENST00000576713 FRYQ5TBA9 3013 aa9.46□□□□□ -0.89
NPLOC4-219ENST00000576713 CAPN8A6NHC0 703 aa9.46□□□□□ -0.9
NPLOC4-219ENST00000576713 PRAMEF26H0Y7S4 382 aa9.46□□□□□ -0.9
NPLOC4-219ENST00000576713 TLR4O00206 839 aa9.46□□□□□ -0.9
NPLOC4-219ENST00000576713 VILLO15195 856 aa9.46□□□□□ -0.9
NPLOC4-219ENST00000576713 USP12O75317 370 aa9.46□□□□□ -0.9
NPLOC4-219ENST00000576713 NEBLO76041 1014 aa9.46□□□□□ -0.9
NPLOC4-219ENST00000576713 RECQL5O94762 991 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms