RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 E7EVH7 732 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 LMO7DNF2Z398 122 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 PGRMC1O00264 195 aaKnown RBP12.92□□□□□ -0.34
CLK3-224ENST00000568605 SIGLEC6O43699 453 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 CRTAMO95727 393 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 GAS8O95995 478 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 SOD1P00441 154 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 CHRNA4P43681 627 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 RPIAP49247 311 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 LMAN1P49257 510 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 ILKQ13418 452 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 ALS2CLQ60I27 953 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 LVRNQ6Q4G3 990 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 PHYKPLQ8IUZ5 450 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 TRAM1L1Q8N609 369 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 FAM181AQ8N9Y4 354 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 FRMD8Q9BZ67 464 aaPredicted RBP12.92□□□□□ -0.34
CLK3-224ENST00000568605 CARS2Q9HA77 564 aaKnown RBP12.92□□□□□ -0.34
CLK3-224ENST00000568605 CYP4F12Q9HCS2 524 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 VPS18Q9P253 973 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 PAK5Q9P286 719 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 SPO11Q9Y5K1 396 aa12.92□□□□□ -0.34
CLK3-224ENST00000568605 ASXL3Q9C0F0 2248 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 MED19A0JLT2 244 aaPredicted RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 GPR89AB7ZAQ6 455 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 CES2O00748 559 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 INPP4BO15327 924 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 STX7O15400 261 aaKnown RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 RFPL3O75679 317 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 ASMTLO95671 621 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 AP2A1O95782 977 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 ATP1A1P05023 1023 aaKnown RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 GPR89BP0CG08 455 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 CKMT2P17540 419 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 TCP1P17987 556 aaKnown RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 ADRA1AP35348 466 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 SPAM1P38567 509 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 ILF3Q12906 894 aaKnown RBP eCLIP12.91□□□□□ -0.34
CLK3-224ENST00000568605 FOXC1Q12948 553 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 SIX1Q15475 284 aaPredicted RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 TAF1AQ15573 450 aaPredicted RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 C6orf132Q5T0Z8 1188 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 RANBP10Q6VN20 620 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 RFLNAQ6ZTI6 216 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 GALNT13Q8IUC8 556 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 KLHDC8BQ8IXV7 354 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 OR1E3Q8WZA6 343 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 LGR4Q9BXB1 951 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 GSDMCQ9BYG8 508 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 ZCCHC2Q9C0B9 1178 aaKnown RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 TCEAL2Q9H3H9 227 aaPredicted RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 RMI1Q9H9A7 625 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 TRNAU1APQ9NX07 287 aaKnown RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 TTC7AQ9ULT0 858 aaPredicted RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 SLC17A4Q9Y2C5 497 aa12.91□□□□□ -0.34
CLK3-224ENST00000568605 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
CLK3-224ENST00000568605 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 FADS2P1A8MWK0 482 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 TRIM38O00635 465 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 METTL18O95568 372 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 AGTP01019 485 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 IVLP07476 585 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 BPIP17213 487 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
CLK3-224ENST00000568605 ACP1P24666 158 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 PMLP29590 882 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 GNPDA1P46926 289 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 ACADVLP49748 655 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 C1orf61Q13536 156 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 DEFB133Q30KQ1 61 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 PROX2Q3B8N5 592 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 RASGEF1CQ8N431 466 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 GPR26Q8NDV2 337 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 BRSK1Q8TDC3 778 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 ADAMTS14Q8WXS8 1223 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 NAT6Q93015 286 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 COX14Q96I36 57 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 APOLD1Q96LR9 279 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 VPS35Q96QK1 796 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 OR2M4Q96R27 311 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 OSBPL9Q96SU4 736 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 APOL2Q9BQE5 337 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 ARNT2Q9HBZ2 717 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 MRPL40Q9NQ50 206 aaKnown RBP12.9□□□□□ -0.34
CLK3-224ENST00000568605 IL17CQ9P0M4 197 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 PNMA8BQ9ULN7 279 aaPredicted RBP12.9□□□□□ -0.34
CLK3-224ENST00000568605 SUFUQ9UMX1 484 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 SNX12Q9UMY4 172 aa12.9□□□□□ -0.34
CLK3-224ENST00000568605 DRG1Q9Y295 367 aaKnown RBP12.9□□□□□ -0.34
CLK3-224ENST00000568605 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms