RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SUN2Q9UH99 717 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 CCDC189A1A4V9 331 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 RGSL1A5PLK6 1076 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 TBC1D3BA6NDS4 549 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 NPIPB15A6NHN6 443 aaPredicted RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 PRRT4C9JH25 899 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 F8W8V4 182 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 H3BMM5 538 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 TRIM13O60858 407 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 LEFTY1O75610 366 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 SNUPNO95149 360 aaKnown RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 FGF3P11487 239 aaPredicted RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 ZNF7P17097 686 aaPredicted RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 POU3F3P20264 500 aaPredicted RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 FMO4P31512 558 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 GJA4P35212 333 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 GRIA2P42262 883 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 SKIV2L2P42285 1042 aaKnown RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 CDKN2DP55273 166 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 HNRNPH2P55795 449 aaKnown RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 GRM2Q14416 872 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 HNRNPA1L2Q32P51 320 aaKnown RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 PSAPL1Q6NUJ1 521 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 ERAP2Q6P179 960 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 ZNF549Q6P9A3 640 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 C6orf89Q6UWU4 347 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 EP400NLQ6ZTU2 488 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 CCDC121Q6ZUS5 278 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 DSG4Q86SJ6 1040 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 C10orf107Q8IVU9 208 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 RBFAQ8N0V3 343 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 FSTL5Q8N475 847 aaPredicted RBP13.72□□□□□ -0.21
TPM1-215ENST00000558868 TMIEQ8NEW7 156 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 OR8D1Q8WZ84 308 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 VOPP1Q96AW1 172 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 ULK4Q96C45 1275 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 UBXN10Q96LJ8 280 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 GUCD1Q96NT3 240 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 GPR78Q96P69 363 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 SIKE1Q9BRV8 207 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 CDH19Q9H159 772 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 FAM96AQ9H5X1 160 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 ASB8Q9H765 288 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 IGSF5Q9NSI5 407 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 PKD2L2Q9NZM6 624 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 EPS15L1Q9UBC2 864 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 CDH22Q9UJ99 828 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 USH1CQ9Y6N9 552 aa13.72□□□□□ -0.21
TPM1-215ENST00000558868 TRBV5-4A0A0C4DH59 114 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 G3V2L1 256 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 TNFRSF10AO00220 468 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 PRMT5O14744 637 aaPredicted RBP13.71□□□□□ -0.21
TPM1-215ENST00000558868 NPC1O15118 1278 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 TBX10O75333 385 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
TPM1-215ENST00000558868 PRAMEF1O95521 474 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 APODP05090 189 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 CCDC166P0CW27 439 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 BPIP17213 487 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.21
TPM1-215ENST00000558868 GDI1P31150 447 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 OPRD1P41143 372 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 SLC1A6P48664 564 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 OCRLQ01968 901 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 IFT88Q13099 833 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 NFATC2Q13469 925 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 ITGA9Q13797 1035 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 CSHL1Q14406 222 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 ZNF460Q14592 562 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 PTPRRQ15256 657 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 LIPMQ5VYY2 423 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 LRRC66Q68CR7 880 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 CGB2Q6NT52 195 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 PARM1Q6UWI2 310 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 FAM151BQ6UXP7 276 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 RAVER1Q8IY67 606 aaKnown RBP13.71□□□□□ -0.21
TPM1-215ENST00000558868 PIANPQ8IYJ0 282 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 PHTF2Q8N3S3 785 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 NKAPQ8N5F7 415 aaKnown RBP13.71□□□□□ -0.21
TPM1-215ENST00000558868 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 SUSD6Q92537 303 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 NXPE3Q969Y0 559 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 EID2BQ96D98 161 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 PPP1R16AQ96I34 528 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 KXD1Q9BQD3 176 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 PLA2G2FQ9BZM2 168 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 CLPBQ9H078 707 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 IL26Q9NPH9 171 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 OXSMQ9NWU1 459 aa13.71□□□□□ -0.21
TPM1-215ENST00000558868 B4GALT6Q9UBX8 382 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms