RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SLC35F5Q8WV83 523 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 ABTB1Q969K4 478 aaPredicted RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 HLA-DQB2P05538 268 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 HOXB2P14652 356 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 NAE1Q13564 534 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 RNASEH2BQ5TBB1 312 aaKnown RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 CHSY3Q70JA7 882 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 C16orf62Q7Z3J2 963 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 ADCK1Q86TW2 530 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 MYLK2Q9H1R3 596 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 SFXN1Q9H9B4 322 aa17.28■□□□□ 0.36
PTPN21-208ENST00000556564 POLR3HQ9Y535 204 aaPredicted RBP17.28■□□□□ 0.36
PTPN21-208ENST00000556564 HLA-EP13747 358 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 SSR2P43308 183 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 CLK3P49761 638 aaKnown RBP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 LRRC32Q14392 662 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 TMEM110Q86TL2 294 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 ACMSDQ8TDX5 336 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 UTP15Q8TED0 518 aaKnown RBP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 DNAJC28Q9NX36 388 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 SMNDC1O75940 238 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 ANXA6P08133 673 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 TCF4P15884 667 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 IL1R2P27930 398 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 ZNF786Q8N393 782 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 PLEKHO2Q8TD55 490 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 ELAC1Q9H777 363 aaKnown RBP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 SCTRP47872 440 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 FOXM1Q08050 763 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 RFTN1Q14699 578 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 FASTKD3Q14CZ7 662 aaKnown RBP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 TTC33Q6PID6 262 aaPredicted RBP17.27■□□□□ 0.36
PTPN21-208ENST00000556564 NELL1Q92832 810 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 PCDHGA4Q9Y5G9 962 aa17.27■□□□□ 0.36
PTPN21-208ENST00000556564 ATP6AP2A0A1C7CYW4 349 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 B4DGG1 531 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 ATP6AP2O75787 350 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 PDE5AO76074 875 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 CCND1P24385 295 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 PTP4A2Q12974 167 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 OR4A15Q8NGL6 344 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 NXNL1Q96CM4 212 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 SPATS2LQ9NUQ6 558 aaKnown RBP17.27■□□□□ 0.35
PTPN21-208ENST00000556564 STRCQ7RTU9 1775 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 EDDM13A0A1B0GTR0 161 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 CMPK1P30085 196 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 LRRC57Q8N9N7 239 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 RDH11Q8TC12 318 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 LRRC15Q8TF66 581 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 TMEM40Q8WWA1 233 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 FBXL12Q9NXK8 326 aa17.27■□□□□ 0.35
PTPN21-208ENST00000556564 PMM2O15305 246 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 PTPN4P29074 926 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 POLD2P49005 469 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 DRG2P55039 364 aaKnown RBP17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ZNF490Q9ULM2 529 aaPredicted RBP17.26■□□□□ 0.35
PTPN21-208ENST00000556564 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 AZIN1O14977 448 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 GMFGO60234 142 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 GABRB2P47870 512 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 NCBP2-AS2Q69YL0 99 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 TTC27Q6P3X3 843 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 IRF7Q92985 503 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 C12orf66Q96MD2 445 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 RNF145Q96MT1 663 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 SLC25A23Q9BV35 468 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 CHURC1-FNTBB4DL54 471 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 COCHO43405 550 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 IRF5Q13568 498 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 LY6G5CQ5SRR4 150 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 LDLRAP1Q5SW96 308 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 TMEM130Q8N3G9 435 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 VPS4AQ9UN37 437 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 MTF2Q9Y483 593 aaPredicted RBP17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ZMPSTE24O75844 475 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 CA3P07451 260 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 FAM163BP0C2L3 166 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 MTHFRP42898 656 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 PKNOX1P55347 436 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 COPZ1P61923 177 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 DEPDC1Q5TB30 811 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 CERS6Q6ZMG9 384 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 TMEM139Q8IV31 216 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 BRSK1Q8TDC3 778 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 NTAN1Q96AB6 310 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ACDQ96AP0 544 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 MCCC1Q96RQ3 725 aaPredicted RBP17.26■□□□□ 0.35
PTPN21-208ENST00000556564 CDRT15Q96T59 188 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 SRMSQ9H3Y6 488 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 DNAJC11Q9NVH1 559 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ADAMTS5Q9UNA0 930 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 ILVBLA1L0T0 632 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 SNTNA6NMZ2 147 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 OR6A2O95222 327 aa17.26■□□□□ 0.35
PTPN21-208ENST00000556564 MS4A13Q5J8X5 152 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms