RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SMAD9O15198 467 aaKnown RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 ADAMDEC1O15204 470 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 LCATP04180 440 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 APOA4P06727 396 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 HOXD3P31249 432 aaPredicted RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 EIF2S3P41091 472 aaKnown RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 MSH2P43246 934 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 COMPP49747 757 aaPredicted RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 LIG4P49917 911 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 GPR143P51810 404 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 ROR2Q01974 943 aaKnown RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 CDC16Q13042 620 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 PSMD6Q15008 389 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 ZNF805Q5CZA5 627 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 TYW3Q6IPR3 259 aaKnown RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 SDCCAG8Q86SQ7 713 aaPredicted RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 SCYL3Q8IZE3 742 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 POGLUT1Q8NBL1 392 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 TRPC4APQ8TEL6 797 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 RADILQ96JH8 1075 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 KCNN2Q9H2S1 579 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 RABEP2Q9H5N1 569 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 CNGB3Q9NQW8 809 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 ZBTB40Q9NUA8 1239 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 WSB2Q9NYS7 404 aaPredicted RBP5.47□□□□□ -1.53
SSR3-208ENST00000496050 ACSL5Q9ULC5 683 aa5.47□□□□□ -1.53
SSR3-208ENST00000496050 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 H7C0S8 307 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 J3KR12 359 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 MMP9P14780 707 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 TRIM21P19474 475 aaKnown RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 TNFRSF1BP20333 461 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 EEF1DP29692 281 aaKnown RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 CAPZA2P47755 286 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 RFX2P48378 723 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 RFX5P48382 616 aaPredicted RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 MMP14P50281 582 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 C21orf58P58505 322 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 CSNK2A1P68400 391 aaPredicted RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 SREBF2Q12772 1141 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 KLF9Q13886 244 aaPredicted RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 ETFDHQ16134 617 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 EIF2S3LQ2VIR3 472 aaKnown RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 TMEM198Q66K66 360 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 MINDY1Q8N5J2 469 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 CSNK2A3Q8NEV1 391 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 APBB2Q92870 758 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 TMCO6Q96DC7 493 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 EGLN2Q96KS0 407 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 ABHD1Q96SE0 405 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 PAFAH2Q99487 392 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 MMP25Q9NPA2 562 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 PAG1Q9NWQ8 432 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 ELOVL5Q9NYP7 299 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 BCCIPQ9P287 314 aaKnown RBP eCLIP5.46□□□□□ -1.54
SSR3-208ENST00000496050 SLC9A2Q9UBY0 812 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 DBNLQ9UJU6 430 aaKnown RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 ZHX1Q9UKY1 873 aaPredicted RBP5.46□□□□□ -1.54
SSR3-208ENST00000496050 PLAGL1Q9UM63 463 aa5.46□□□□□ -1.54
SSR3-208ENST00000496050 CPED1A4D0V7 1026 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 A6NL46 340 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 TIMM23O14925 209 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 RGS14O43566 566 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 MOSPD3O75425 235 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 EGFP01133 1207 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 ICAM1P05362 532 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 ABCB1P08183 1280 aaPredicted RBP5.45□□□□□ -1.54
SSR3-208ENST00000496050 PSG1P11464 419 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 SUOXP51687 545 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 UBXN2AP68543 259 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 FOXM1Q08050 763 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 DSC1Q08554 894 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 MAD2L1Q13257 205 aaPredicted RBP5.45□□□□□ -1.54
SSR3-208ENST00000496050 GRAPQ13588 217 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 HNF4GQ14541 408 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 DCST1Q5T197 706 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 DAB2IPQ5VWQ8 1189 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 ADALQ6DHV7 355 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 DPY19L2P1Q6NXN4 242 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 KCTD18Q6PI47 426 aaPredicted RBP5.45□□□□□ -1.54
SSR3-208ENST00000496050 KRT77Q7Z794 578 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 HM13Q8TCT9 377 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 DACH2Q96NX9 599 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 HAUS8Q9BT25 410 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 RBM38Q9H0Z9 239 aaKnown RBP5.45□□□□□ -1.54
SSR3-208ENST00000496050 OR10A4Q9H209 315 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 PIGMQ9H3S5 423 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 DENND2DQ9H6A0 471 aaPredicted RBP5.45□□□□□ -1.54
SSR3-208ENST00000496050 C17orf75Q9HAS0 396 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 CCDC177Q9NQR7 707 aaPredicted RBP5.45□□□□□ -1.54
SSR3-208ENST00000496050 DNAJB4Q9UDY4 337 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 GIMAP2Q9UG22 337 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 PADI1Q9ULC6 663 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 FZD10Q9ULW2 581 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
SSR3-208ENST00000496050 SPINT2O43291 252 aa5.44□□□□□ -1.54
SSR3-208ENST00000496050 GH2P01242 217 aa5.44□□□□□ -1.54
SSR3-208ENST00000496050 BDKRB2P30411 391 aa5.44□□□□□ -1.54
SSR3-208ENST00000496050 MXI1P50539 228 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms