RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 HCSTQ9UBK5 93 aa17.27■□□□□ 0.35
LDLRAP1-201ENST00000374338 GTF2IRD1Q9UHL9 959 aa17.27■□□□□ 0.35
LDLRAP1-201ENST00000374338 GPSM3Q9Y4H4 160 aa17.27■□□□□ 0.35
LDLRAP1-201ENST00000374338 PRORSD1PA6NEY8 169 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 MYCP01106 439 aaPredicted RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 MX2P20592 715 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 PBX3P40426 434 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 RAD23AP54725 363 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 ZNF280BQ86YH2 543 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 SH3RF2Q8TEC5 729 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 SMARCD1Q96GM5 515 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 UHRF1Q96T88 793 aaPredicted RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 RAD21L1Q9H4I0 556 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 HMG20AQ9NP66 347 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 OSER1Q9NX31 292 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 COPG1Q9Y678 874 aaKnown RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 NUAK1O60285 661 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 MLNP12872 115 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 TFEBP19484 476 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 POLR2IP36954 125 aaKnown RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 CAP1Q01518 475 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 TRIM25Q14258 630 aaKnown RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 BNIPLQ7Z465 357 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 MIB1Q86YT6 1006 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 CBR4Q8N4T8 237 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 FCRL2Q96LA5 508 aaPredicted RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 TUBA1CQ9BQE3 449 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 TRIT1Q9H3H1 467 aaKnown RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 NMRAL1Q9HBL8 299 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 CHST12Q9NRB3 414 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 CRNNQ9UBG3 495 aaPredicted RBP17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 AURKCQ9UQB9 309 aa17.26■□□□□ 0.35
LDLRAP1-201ENST00000374338 SCAMP3O14828 347 aaKnown RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 ABCB1P08183 1280 aaPredicted RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 PIRTP0C851 137 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 HNRNPLP14866 589 aaKnown RBP eCLIP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 ELNP15502 786 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 EEF1DP29692 281 aaKnown RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 SPRP35270 261 aaPredicted RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 CLK3P49761 638 aaKnown RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 MERTKQ12866 999 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 BFSP2Q13515 415 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 SEL1L3Q68CR1 1132 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 MFSD2AQ8NA29 543 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 CYGBQ8WWM9 190 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 TRIB2Q92519 343 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 TEKT5Q96M29 485 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 CPNE1Q99829 537 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 GPN2Q9H9Y4 310 aaPredicted RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 EFCAB1Q9HAE3 211 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 CNOT6Q9ULM6 557 aaKnown RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 ACTL7AQ9Y615 435 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 TEX28O15482 410 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 GRID2O43424 1007 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 SLC7A1P30825 629 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 LHX1P48742 406 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 LIMK2P53671 638 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 CDC42EP1Q00587 391 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 PLCL1Q15111 1095 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 SLC39A12Q504Y0 691 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 FBXO48Q5FWF7 155 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 PLEKHG7Q6ZR37 379 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 PIWIL3Q7Z3Z3 882 aaKnown RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 TMEM135Q86UB9 458 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 ANKFN1Q8N957 763 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 BPIFB6Q8NFQ5 453 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 CANT1Q8WVQ1 401 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 NXNL1Q96CM4 212 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 C17orf80Q9BSJ5 609 aa17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 THG1LQ9NWX6 298 aaKnown RBP17.25■□□□□ 0.35
LDLRAP1-201ENST00000374338 OR51F1A6NGY5 319 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 GOLGA8CPA6NN73 597 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 GRIA4P48058 902 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 PSME3P61289 254 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 OCA2Q04671 838 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 RFTN1Q14699 578 aaPredicted RBP17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 SPANXN3Q5MJ09 141 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 KCTD11Q693B1 232 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 AKAP14Q86UN6 197 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 SLC43A3Q8NBI5 491 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 HCAR2Q8TDS4 363 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 PABPC5Q96DU9 382 aaKnown RBP17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 ILKAPQ9H0C8 392 aaPredicted RBP17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 IL1RL2Q9HB29 575 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 AKIP1Q9NQ31 210 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 CASS4Q9NQ75 786 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 RBM22Q9NW64 420 aaKnown RBP eCLIP17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 CCDC167Q9P0B6 97 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 C9JVG2 144 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 MT-ND1P03886 318 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 CRHR2Q13324 411 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 GRTP1Q5TC63 336 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 OVOS1Q6IE37 1185 aa17.24■□□□□ 0.35
LDLRAP1-201ENST00000374338 UGT3A1Q6NUS8 523 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms