RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 NAGSQ8N159 534 aa21.69■■□□□ 1.06
DDX39A-215ENST00000590696 NDUFAF2Q8N183 169 aa21.69■■□□□ 1.06
DDX39A-215ENST00000590696 SMIM14Q96QK8 99 aa21.69■■□□□ 1.06
DDX39A-215ENST00000590696 NUDT22Q9BRQ3 303 aa21.69■■□□□ 1.06
DDX39A-215ENST00000590696 NUP85Q9BW27 656 aa21.69■■□□□ 1.06
DDX39A-215ENST00000590696 PLEKHM1Q9Y4G2 1056 aa21.69■■□□□ 1.06
DDX39A-215ENST00000590696 CD48P09326 243 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 CCL4P13236 92 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 CD1CP29017 333 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 SSR1P43307 286 aaKnown RBP21.68■■□□□ 1.06
DDX39A-215ENST00000590696 PEX6Q13608 980 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 LINC00303Q3SY05 128 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 LRRC66Q68CR7 880 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 CAVIN1Q6NZI2 390 aaKnown RBP21.68■■□□□ 1.06
DDX39A-215ENST00000590696 VASH2Q86V25 355 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 EXD3Q8N9H8 876 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 RCBTB1Q8NDN9 531 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 AP2M1Q96CW1 435 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 SCARF2Q96GP6 870 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-215ENST00000590696 POLR1EQ9GZS1 481 aaKnown RBP21.68■■□□□ 1.06
DDX39A-215ENST00000590696 CDH19Q9H159 772 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 RCOR3Q9P2K3 495 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-215ENST00000590696 TMEM98Q9Y2Y6 226 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 PCDHB11Q9Y5F2 797 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 COL6A6A6NMZ7 2263 aa21.68■■□□□ 1.06
DDX39A-215ENST00000590696 IGHV5-10-1A0A0J9YXX1 117 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 A0A1W2PQJ5 194 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 PPM1DO15297 605 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 MFSD11O43934 449 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 SOD1P00441 154 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 CYP1A2P05177 515 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 ACTR1BP42025 376 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 GPR3P46089 330 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 ACTR1AP61163 376 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 PTSQ03393 145 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 CLPPQ16740 277 aaPredicted RBP21.67■■□□□ 1.06
DDX39A-215ENST00000590696 CCDC122Q5T0U0 273 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 TMEM164Q5U3C3 297 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 ADAMTSL4Q6UY14 1074 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 DTX1Q86Y01 620 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.67■■□□□ 1.06
DDX39A-215ENST00000590696 FAM71BQ8TC56 605 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 SYN2Q92777 582 aaPredicted RBP21.67■■□□□ 1.06
DDX39A-215ENST00000590696 SCAMP4Q969E2 229 aa21.67■■□□□ 1.06
DDX39A-215ENST00000590696 A0A087X0T9 212 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 A0A0J9YYE9 177 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 MYO1FO00160 1098 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 TRBC1P01850 177 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 SERPING1P05155 500 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 FAM228BP0C875 321 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 CD82P27701 267 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 GARSP41250 739 aaKnown RBP21.66■■□□□ 1.06
DDX39A-215ENST00000590696 EPHB1P54762 984 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 DSC2Q02487 901 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 IHHQ14623 411 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 NFKBIBQ15653 356 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 HADHQ16836 314 aaKnown RBP21.66■■□□□ 1.06
DDX39A-215ENST00000590696 NKAIN2Q5VXU1 208 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 NCBP2-AS2Q69YL0 99 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 MARK2Q7KZI7 788 aaKnown RBP21.66■■□□□ 1.06
DDX39A-215ENST00000590696 TRIM74Q86UV6 250 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 CPLX3Q8WVH0 158 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 EXTL1Q92935 676 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 CCDC74BQ96LY2 380 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 OR2M4Q96R27 311 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 AGAP2Q99490 1192 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 B3GNT4Q9C0J1 378 aa21.66■■□□□ 1.06
DDX39A-215ENST00000590696 TENM4Q6N022 2769 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 HGSO14964 777 aaPredicted RBP21.65■■□□□ 1.06
DDX39A-215ENST00000590696 MATN3O15232 486 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 MAP3K6O95382 1288 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 ZNF30P17039 623 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 ARSEP51690 589 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 LIMK2P53671 638 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 FANCCQ00597 558 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 GALNT2Q10471 571 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 DPYSL3Q14195 570 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 PAFAH1B3Q15102 231 aaKnown RBP21.65■■□□□ 1.06
DDX39A-215ENST00000590696 ATP13A4Q4VNC1 1196 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 PYCR3Q53H96 274 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 ZNF765Q7L2R6 523 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 NLRP8Q86W28 1048 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 MAML1Q92585 1016 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 ARHGAP9Q9BRR9 750 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 FUCA2Q9BTY2 467 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 CHKBQ9Y259 395 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 PCDHGA4Q9Y5G9 962 aa21.65■■□□□ 1.06
DDX39A-215ENST00000590696 PIEZO2Q9H5I5 2752 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 IGHV1OR21-1A0A087WYE8 117 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 SLC28A2O43868 658 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 ITGB2P05107 769 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 FGF3P11487 239 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-215ENST00000590696 WT1P19544 449 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-215ENST00000590696 CES1P23141 567 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 GJC1P36383 396 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 PBX1P40424 430 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 ZBED6P86452 979 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 IFI16Q16666 785 aaKnown RBP21.64■■□□□ 1.05
DDX39A-215ENST00000590696 ALG1LQ6GMV1 187 aa21.64■■□□□ 1.05
DDX39A-215ENST00000590696 TIGD7Q6NT04 549 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms