RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TEKT5Q96M29 485 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 AGAP2Q99490 1192 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 AMFRQ9UKV5 643 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 TMEM98Q9Y2Y6 226 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 AK5Q9Y6K8 562 aa16.58■□□□□ 0.24
SREBF1-219ENST00000580540 A0A0U1RQJ8 604 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 CCDC66A2RUB6 948 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 EME2A4GXA9 379 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-219ENST00000580540 INPP4BO15327 924 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 ASMTLO95671 621 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 CTNNA2P26232 953 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 CETN2P41208 172 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 RWDD2BP57060 319 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 COPS2P61201 443 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 CDK18Q07002 472 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 DPTQ07507 201 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 WASHC5Q12768 1159 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 PERM1Q5SV97 790 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 BBS12Q6ZW61 710 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 PID1Q7Z2X4 250 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 LYSMD3Q7Z3D4 306 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 TRIM74Q86UV6 250 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 NRSN1Q8IZ57 195 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 SDR16C5Q8N3Y7 309 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 ARL10Q8N8L6 244 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 CCL4L1Q8NHW4 92 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 OSBPL8Q9BZF1 889 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 C10orf88Q9H8K7 445 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 PKD2L2Q9NZM6 624 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 SHOC2Q9UQ13 582 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 ASXL3Q9C0F0 2248 aa16.57■□□□□ 0.24
SREBF1-219ENST00000580540 SRRM3A6NNA2 597 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-219ENST00000580540 B4DGG1 531 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 TAF4O00268 1085 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 MTSS1O43312 755 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 PTMAP06454 111 aaKnown RBP16.56■□□□□ 0.24
SREBF1-219ENST00000580540 CEACAM5P06731 702 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 NFKB1P19838 968 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 TNNT3P45378 269 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-219ENST00000580540 ADAMTSL4Q6UY14 1074 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 MARK2Q7KZI7 788 aaKnown RBP16.56■□□□□ 0.24
SREBF1-219ENST00000580540 ZNF765Q7L2R6 523 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 PEX26Q7Z412 305 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 NAT6Q93015 286 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 HIC2Q96JB3 615 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 QKIQ96PU8 341 aaKnown RBP eCLIP16.56■□□□□ 0.24
SREBF1-219ENST00000580540 DEPDC7Q96QD5 511 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 TRIB3Q96RU7 358 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 LYSMD1Q96S90 227 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 FAM118BQ9BPY3 351 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 FRMD8Q9BZ67 464 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-219ENST00000580540 GPR63Q9BZJ6 419 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 DPEP2Q9H4A9 486 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 FAM83DQ9H4H8 585 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 ZFYVE1Q9HBF4 777 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 SUFUQ9UMX1 484 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 GPSM3Q9Y4H4 160 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 MYLKQ15746 1914 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 USP24Q9UPU5 2620 aa16.56■□□□□ 0.24
SREBF1-219ENST00000580540 LRP4O75096 1905 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 HACD1B0YJ81 288 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 APOC4-APOC2K7ER74 178 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 CSO75390 466 aaKnown RBP16.55■□□□□ 0.24
SREBF1-219ENST00000580540 FTCDO95954 541 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 SOD1P00441 154 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 APOC2P02655 101 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 FUCA1P04066 466 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 CAPNS1P04632 268 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 PYGLP06737 847 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 TEAD1P28347 426 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 CD68P34810 354 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-219ENST00000580540 SPINT3P49223 89 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 OTUD4Q01804 1114 aaKnown RBP16.55■□□□□ 0.24
SREBF1-219ENST00000580540 ALS2CLQ60I27 953 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 AADACL2Q6P093 401 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 PROSER1Q86XN7 944 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 SYCE1Q8N0S2 351 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 ZNF567Q8N184 647 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 DCBLD1Q8N8Z6 715 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 LRRC57Q8N9N7 239 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 ACTL9Q8TC94 416 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 PTCD2Q8WV60 388 aaKnown RBP16.55■□□□□ 0.24
SREBF1-219ENST00000580540 NXPE2Q96DL1 559 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 CCDC3Q9BQI4 270 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 HERPUD2Q9BSE4 406 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 GSDMCQ9BYG8 508 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 FAM153AQ9UHL3 310 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 PACSIN2Q9UNF0 486 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-219ENST00000580540 PCDHB1Q9Y5F3 818 aa16.55■□□□□ 0.24
SREBF1-219ENST00000580540 NDST3O95803 873 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 PYGMP11217 842 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 AK4P27144 223 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-219ENST00000580540 RBL1P28749 1068 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 WNT3AP56704 352 aa16.54■□□□□ 0.24
SREBF1-219ENST00000580540 EIF3EP60228 445 aaKnown RBP16.54■□□□□ 0.24
SREBF1-219ENST00000580540 ILF3Q12906 894 aaKnown RBP eCLIP16.54■□□□□ 0.24
SREBF1-219ENST00000580540 XRCC4Q13426 336 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms