RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 DYNLT1P63172 113 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 GABREP78334 506 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 CCL7P80098 99 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 AP1B1Q10567 949 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 PDK1Q15118 436 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 CERCAMQ5T4B2 595 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 ADAMTSL4Q6UY14 1074 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 PDZD3Q86UT5 571 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 TRIM74Q86UV6 250 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 NLRP8Q86W28 1048 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 RFX6Q8HWS3 928 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 NDUFAF2Q8N183 169 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 AP2M1Q96CW1 435 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 EID2BQ96D98 161 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 SCARF2Q96GP6 870 aaPredicted RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 ZNF830Q96NB3 372 aaPredicted RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 TRIB3Q96RU7 358 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 MAK16Q9BXY0 300 aaKnown RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 BRD8Q9H0E9 1235 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 SUDS3Q9H7L9 328 aaPredicted RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 ASCL3Q9NQ33 180 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 DDX56Q9NY93 547 aaKnown RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 GOLGA6AQ9NYA3 693 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 RPL26L1Q9UNX3 145 aaKnown RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 SATB2Q9UPW6 733 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 TMEM98Q9Y2Y6 226 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 PLEKHM1Q9Y4G2 1056 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 PCDHA13Q9Y5I0 950 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 FASNP49327 2511 aaKnown RBP14.6□□□□□ -0.07
FANCA-220ENST00000566409 KALRNO60229 2985 aa14.6□□□□□ -0.07
FANCA-220ENST00000566409 ATMQ13315 3056 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 RCCD1A6NED2 376 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 B4DGG1 531 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 SPOPO43791 374 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 FGF1P05230 155 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 AK4P27144 223 aaPredicted RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 ACTN2P35609 894 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 GPR1P46091 355 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 GNPDA1P46926 289 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 HLTFQ14527 1009 aaKnown RBP eCLIP14.59□□□□□ -0.07
FANCA-220ENST00000566409 C3orf38Q5JPI3 329 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 ZNF765Q7L2R6 523 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 B3GNT8Q7Z7M8 397 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 C17orf82Q86X59 251 aaPredicted RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 IMP4Q96G21 291 aaKnown RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 COX14Q96I36 57 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 HIC2Q96JB3 615 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 AGAP3Q96P47 875 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 RIOK2Q9BVS4 552 aaKnown RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 DPEP2Q9H4A9 486 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 TRNAU1APQ9NX07 287 aaKnown RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 CNOT6Q9ULM6 557 aaKnown RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 PCYT1BQ9Y5K3 369 aaPredicted RBP14.59□□□□□ -0.07
FANCA-220ENST00000566409 RNF215Q9Y6U7 377 aa14.59□□□□□ -0.07
FANCA-220ENST00000566409 CFAP46Q8IYW2 2715 aa14.58□□□□□ -0.07
FANCA-220ENST00000566409 PSTPIP1O43586 416 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 IVLP07476 585 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 GLB1P16278 677 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 PECAM1P16284 738 aaPredicted RBP14.58□□□□□ -0.08
FANCA-220ENST00000566409 ZFXP17010 805 aaPredicted RBP14.58□□□□□ -0.08
FANCA-220ENST00000566409 ADCY8P40145 1251 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 CTBSQ01459 385 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 SPIDRQ14159 915 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 GALNT3Q14435 633 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 PRKD1Q15139 912 aaPredicted RBP14.58□□□□□ -0.08
FANCA-220ENST00000566409 C14orf28Q4W4Y0 310 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 DOK6Q6PKX4 331 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 SPOCD1Q6ZMY3 1216 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 NRSN1Q8IZ57 195 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 Q8N9G6 341 aaPredicted RBP14.58□□□□□ -0.08
FANCA-220ENST00000566409 SPATA22Q8NHS9 363 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 WDR48Q8TAF3 677 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 GRAMD1AQ96CP6 724 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 SLC46A1Q96NT5 459 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 SLC25A51Q9H1U9 297 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 LRRN3Q9H3W5 708 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 HAUS2Q9NVX0 235 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 SEPT10Q9P0V9 454 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 TAAR2Q9P1P5 351 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 APPL1Q9UKG1 709 aa14.58□□□□□ -0.08
FANCA-220ENST00000566409 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
FANCA-220ENST00000566409 C1orf232A0A0U1RR37 186 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 SOWAHDA6NJG2 315 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 FADS2P1A8MWK0 482 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 PPP1R12AO14974 1030 aaPredicted RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 CST8O60676 142 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 MT-CYBP00156 380 aaPredicted RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 RPLP0P05388 317 aaKnown RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 CA4P22748 312 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 FECHP22830 423 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 PTPN3P26045 913 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 ABCG1P45844 678 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 SPINT3P49223 89 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 MAZP56270 477 aaKnown RBP14.57□□□□□ -0.08
FANCA-220ENST00000566409 CCDC173Q0VFZ6 552 aa14.57□□□□□ -0.08
FANCA-220ENST00000566409 WASHC5Q12768 1159 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms