RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 C7orf26Q96N11 449 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 KLHL32Q96NJ5 620 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 MYADMQ96S97 322 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
TPM1-215ENST00000558868 C1QTNF1Q9BXJ1 281 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 GPAMQ9HCL2 828 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 BPIFA1Q9NP55 256 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 CLEC1BQ9P126 229 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 KLHL14Q9P2G3 628 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 IL36AQ9UHA7 158 aa13.75□□□□□ -0.21
TPM1-215ENST00000558868 KIF26AQ9ULI4 1882 aaPredicted RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 ATXN2Q99700 1313 aaKnown RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 EDDM13A0A1B0GTR0 161 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 UBA6A0AVT1 1052 aaPredicted RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 TRIM24O15164 1050 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CLDN7O95471 211 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SERPINE1P05121 402 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 PYGLP06737 847 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 RBP1P09455 135 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 LTA4HP09960 611 aaKnown RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 ZNF30P17039 623 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CD9P21926 228 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 FDXRP22570 491 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 XPAP23025 273 aaPredicted RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 SLC6A11P48066 632 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SUOXP51687 545 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 ADARP55265 1226 aaKnown RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 IRX4P78413 519 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 XIAPP98170 497 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 PEX6Q13608 980 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SEMA3AQ14563 771 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 PCLAFQ15004 111 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CDKN3Q16667 212 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 PTPRNQ16849 979 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CTC1Q2NKJ3 1217 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 GAB4Q2WGN9 574 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 GPR33Q49SQ1 333 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 FNDC3BQ53EP0 1204 aaKnown RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 LRRC8EQ6NSJ5 796 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CRTC1Q6UUV9 634 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 ZYG11AQ6WRX3 759 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 OTOAQ7RTW8 1153 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 LDB1Q86U70 411 aaPredicted RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 CHST14Q8NCH0 376 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 KCTD4Q8WVF5 259 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 LPGAT1Q92604 370 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SMIM14Q96QK8 99 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 NDNQ99608 321 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 MRPL57Q9BQC6 102 aaKnown RBP13.74□□□□□ -0.21
TPM1-215ENST00000558868 TRIM55Q9BYV6 548 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 BRD9Q9H8M2 597 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SYTL2Q9HCH5 934 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 SLCO1B3Q9NPD5 702 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 THAP1Q9NVV9 213 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CLDND1Q9NY35 253 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 TAS2R13Q9NYV9 303 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CRYL1Q9Y2S2 319 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 PCDHB1Q9Y5F3 818 aa13.74□□□□□ -0.21
TPM1-215ENST00000558868 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 GLYATL1P3A0A0U1RQE8 302 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 VPS26AO75436 327 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 TOP3BO95985 862 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 ESR1P03372 595 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 PRNPP04156 253 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 RALBP11234 206 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 PKMP14618 531 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 VIPR1P32241 457 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 KDSRQ06136 332 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 BST1Q10588 318 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 ARHGEF7Q14155 803 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 ACAP2Q15057 778 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 ITPRIPL2Q3MIP1 535 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 ZNF805Q5CZA5 627 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 UGT3A1Q6NUS8 523 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 YTHDF3Q7Z739 585 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 ZSWIM9Q86XI8 627 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 CRLF3Q8IUI8 442 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 CENPLQ8N0S6 344 aaPredicted RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 TERB1Q8NA31 727 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 GRIN3AQ8TCU5 1115 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 PPP4R1Q8TF05 950 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 SORCS1Q8WY21 1168 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 PBXIP1Q96AQ6 731 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 NXNL1Q96CM4 212 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 CCDC126Q96EE4 140 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 OLFM1Q99784 485 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 MECRQ9BV79 373 aa13.73□□□□□ -0.21
TPM1-215ENST00000558868 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 MRPL46Q9H2W6 279 aaKnown RBP13.73□□□□□ -0.21
TPM1-215ENST00000558868 ZNF358Q9NW07 568 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms